Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q34883279)
Watch
English
Differential nuclear scaffold/matrix attachment marks expressed genes.
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
title
Differential nuclear scaffold/matrix attachment marks expressed genes
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
author
Adrian E Platts
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
author name string
Amelia K Linnemann
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
Stephen A Krawetz
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
publication date
18 November 2008
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
published in
Human Molecular Genetics
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
volume
18
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
issue
4
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
page(s)
645-654
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
cites work
Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Real-time PCR quantification using a variable reaction efficiency model
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Combinatorial patterns of histone acetylations and methylations in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Anchoring the genome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Genomewide identification of nuclear matrix attachment regions: an analysis of methods.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Decondensing the protamine domain for transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
The three-dimensional structure of human interphase chromosomes is related to the transcriptome map.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
A map of nuclear matrix attachment regions within the breast cancer loss-of-heterozygosity region on human chromosome 16q22.1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Correlations between scaffold/matrix attachment region (S/MAR) binding activity and DNA duplex destabilization energy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
In silico and wet-bench identification of nuclear matrix attachment regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Large-scale identification and mapping of nuclear matrix-attachment regions in the distal imprinted domain of mouse chromosome 7.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Performance of genomic bordering elements at predefined genomic loci
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Mapping long-range chromatin organization within the chicken alpha-globin gene domain using oligonucleotide DNA arrays.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Nuclear matrix interactions at the human protamine domain: a working model of potentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
The 5'-HS4 chicken beta-globin insulator is a CTCF-dependent nuclear matrix-associated element
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Chromatin loops are selectively anchored using scaffold/matrix-attachment regions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Replication initiation in mammalian cells: changing preferences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Nuclear matrix association of the human beta-globin locus utilizing a novel approach to quantitative real-time PCR
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
The matrix attachment region in the Chinese hamster dihydrofolate reductase origin of replication may be required for local chromatid separation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Computational and in vitro analysis of destabilized DNA regions in the interferon gene cluster: potential of predicting functional gene domains
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Gene density and transcription influence the localization of chromatin outside of chromosome territories detectable by FISH.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Conserved CTCF insulator elements flank the mouse and human beta-globin loci
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Re-defining the chromatin loop domain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Chromosome territories, nuclear architecture and gene regulation in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
The type of DNA attachment sites recovered from nuclear matrix depends on isolation procedure used
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Transcriptional augmentation: modulation of gene expression by scaffold/matrix-attached regions (S/MAR elements).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Association of chromosome territories with the nuclear matrix. Disruption of human chromosome territories correlates with the release of a subset of nuclear matrix proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Comprehensive and definitive molecular cytogenetic characterization of HeLa cells by spectral karyotyping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Scaffold/matrix-attached regions: structural properties creating transcriptionally active loci.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
SARs stimulate but do not confer position independent gene expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Replication and transcription depend on attachment of DNA to the nuclear cage
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Molecular and cellular biology of intermediate filaments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
The size of chromatin loops in HeLa cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
Binding of matrix attachment regions to lamin B1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
8 July 2018
The KLAB Toolbox: a suite of in-house software applications for epigenetic analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
26 October 2018
SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
26 October 2018
In-silico prediction and observations of nuclear matrix attachment.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
26 October 2018
Nuclear matrix interactions within the sperm genome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
26 October 2018
Supercoiled loops and eucaryotic DNA replicaton
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2638830
retrieved
26 October 2018
Scaffold attachments within the human genome
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19017725
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The integrity of a lamin-B1-dependent nucleoskeleton is a fundamental determinant of RNA synthesis in human cells
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19017725
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Let's Validate Those Cell Lines
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19017725
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Extended analysis of the region encompassing the PRM1-->PRM2-->TNP2 domain: genomic organization, evolution and gene identification
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19017725
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/HMG/DDN394
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
PMCID
2638830
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
PubMed ID
19017725
1 reference
stated in
Europe PubMed Central
PMCID
2638830
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19017725%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 January 2020
ResearchGate publication ID
23481950
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit