(Q34895478)

5 August 2017

title

Challenges of detecting directional selection after a bottleneck: lessons from Sorghum bicolor (English)

1 reference

5 August 2017

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5

Andrew H Paterson

1 reference

5 August 2017

Martha T Hamblin

1

1 reference

5 August 2017

Alexandra M Casa

2

1 reference

5 August 2017

Hong Sun

3

1 reference

5 August 2017

Seth C Murray

4

1 reference

5 August 2017

Charles F Aquadro

6

1 reference

5 August 2017

Stephen Kresovich

7

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5 August 2017

language of work or name

English

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publication date

17 March 2006

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5 August 2017

number of pages

12

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inferred from page(s)

published in

Genetics

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5 August 2017

volume

173

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5 August 2017

issue

2

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5 August 2017

page(s)

953-964

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Evidence for a large-scale population structure of Arabidopsis thaliana from genome-wide single nucleotide polymorphism markers

5 August 2017

cites work

1 reference

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A scan of molecular variation leads to the narrow localization of a selective sweep affecting both Afrotropical and cosmopolitan populations of Drosophila melanogaster

8 July 2018

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Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster

8 July 2018

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Evidence for a selective sweep in the wapl region of Drosophila melanogaster

8 July 2018

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Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor

8 July 2018

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Comprehensive molecular cytogenetic analysis of sorghum genome architecture: distribution of euchromatin, heterochromatin, genes and recombination in comparison to rice.

8 July 2018

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Multiple signatures of positive selection downstream of notch on the X chromosome in Drosophila melanogaster

8 July 2018

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Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations

8 July 2018

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The pattern of polymorphism in Arabidopsis thaliana

8 July 2018

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Using genome scans of DNA polymorphism to infer adaptive population divergence

8 July 2018

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A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism

8 July 2018

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Statistical tests of the coalescent model based on the haplotype frequency distribution and the number of segregating sites.

8 July 2018

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Molecular population genetics and the search for adaptive evolution in plants

8 July 2018

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Close split of sorghum and maize genome progenitors

8 July 2018

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Disentangling the effects of demography and selection in human history

8 July 2018

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Heterogeneous patterns of variation among multiple human x-linked Loci: the possible role of diversity-reducing selection in non-africans

8 July 2018

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Detecting the footprint of positive selection in a european population of Drosophila melanogaster: multilocus pattern of variation and distance to coding regions

8 July 2018

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Pattern of polymorphism after strong artificial selection in a domestication event

8 July 2018

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The allele frequency spectrum in genome-wide human variation data reveals signals of differential demographic history in three large world populations

8 July 2018

1 reference

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Demography and natural selection have shaped genetic variation in Drosophila melanogaster: a multi-locus approach

8 July 2018

1 reference

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A microsatellite variability screen for positive selection associated with the "out of Africa" habitat expansion of Drosophila melanogaster

8 July 2018

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DnaSP, DNA polymorphism analyses by the coalescent and other methods

8 July 2018

1 reference

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A High-Density Genetic Recombination Map of Sequence-Tagged Sites for Sorghum, as a Framework for Comparative Structural and Evolutionary Genomics of Tropical Grains and Grasses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Convergent evolution of perenniality in rice and sorghum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Hitchhiking mapping--functional genomics from the population genetics perspective

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Patterns of diversity and recombination along chromosome 1 of maize (Zea mays ssp. mays L.).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Inferences about human demography based on multilocus analyses of noncoding sequences.

8 July 2018

1 reference

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Identifying genes of agronomic importance in maize by screening microsatellites for evidence of selection during domestication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

The signature of positive selection at randomly chosen loci.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

A microsatellite-based multilocus screen for the identification of local selective sweeps.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Generating samples under a Wright-Fisher neutral model of genetic variation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Haldane's sieve and adaptation from the standing genetic variation.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

A genome-wide departure from the standard neutral model in natural populations of Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Hitchhiking under positive Darwinian selection

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Inheritance of the morphological differences between maize and teosinte: comparison of results for two F2 populations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

A test of neutral molecular evolution based on nucleotide data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Adaptive protein evolution at the Adh locus in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

On the number of segregating sites in genetical models without recombination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

A large-scale screen for artificial selection in maize identifies candidate agronomic loci for domestication and crop improvement.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Inferring the effects of demography and selection on Drosophila melanogaster populations from a chromosome-wide scan of DNA variation.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Maximum-likelihood methods for detecting recent positive selection and localizing the selected site in the genome

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

The effects of artificial selection on the maize genome

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Variation after a selective sweep in a subdivided population.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Non-African origin of a local beneficial mutation in D. melanogaster.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Comparative population genetics of the panicoid grasses: sequence polymorphism, linkage disequilibrium and selection in a diverse sample of sorghum bicolor.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Patterns of microsatellite variability among X chromosomes and autosomes indicate a high frequency of beneficial mutations in non-African D. simulans

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Selection versus demography: a multilocus investigation of the domestication process in maize.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

Neutrality tests based on the distribution of haplotypes under an infinite-site model.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526520

The signature of positive selection on standing genetic variation

26 October 2018

1 reference

12 December 2020

Metapopulation models for historical inference

1 reference

12 December 2020

Genetic hitch-hiking in a subdivided population

1 reference

12 December 2020

Diversity and selection in sorghum: simultaneous analyses using simple sequence repeats

1 reference

12 December 2020

10.1534/GENETICS.105.054312

Identifiers

DOI

1 reference

5 August 2017

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5 August 2017

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