(Q34898964)

5 August 2017

title

Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicator species (English)

1 reference

5 August 2017

1 reference

Ary A Hoffmann

4

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Leon Metzeling

series ordinal

3

object named as

Leon Metzeling

1 reference

5 August 2017

Melissa E Carew

1

1 reference

5 August 2017

Vincent J Pettigrove

series ordinal

2

1 reference

5 August 2017

publication date

7 August 2013

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5 August 2017

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5 August 2017

volume

10

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5 August 2017

issue

1

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5 August 2017

page(s)

45

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describes a project that uses

5 August 2017

massive parallel sequencing

1 reference

based on heuristic

inferred from title

exact match

https://scigraph.springernature.com/pub.10.1186/1742-9994-10-45

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cites work

Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing

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Next-generation sequencing technologies for environmental DNA research

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Reproducibility of read numbers in high-throughput sequencing analysis of nematode community composition and structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Identification of Nearctic black flies using DNA barcodes (Diptera: Simuliidae).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Systematics and biogeography of the Gondwanan Orthocladiinae (Diptera: Chironomidae).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Ecometagenetics confirm high tropical rainforest nematode diversity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Assessing macroinvertebrate biodiversity in freshwater ecosystems: advances and challenges in DNA-based approaches

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Combining rapid bioassessment and field-based microcosms for identifying impacts in an urban river

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Isolating the impact of sediment toxicity in urban streams

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Integrated taxonomy: traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

High molecular weight petroleum hydrocarbons differentially affect freshwater benthic macroinvertebrate assemblages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Parallel tagged sequencing on the 454 platform

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

A comprehensive DNA sequence library is essential for identification with DNA barcodes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Developments in aquatic insect biomonitoring: a comparative analysis of recent approaches

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Effects of long-chain hydrocarbon-polluted sediment on freshwater macroinvertebrates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Defining operational taxonomic units using DNA barcode data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Reverse taxonomy: an approach towards determining the diversity of meiobenthic organisms based on ribosomal RNA signature sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

A microcosm test of adaptation and species specific responses to polluted sediments applicable to indigenous chironomids (Diptera).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Terrestrial and aquatic invertebrates as bioindicators for environmental monitoring, with particular reference to mountain ecosystems

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

A field-based microcosm method to assess the effects of polluted urban stream sediments on aquatic macroinvertebrates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Biological identifications through DNA barcodes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Phylogeny of the genus Chironomus (Diptera) inferred from DNA sequences of mitochondrial cytochrome b and cytochrome oxidase I.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

The cytochrome b region in the mitochondrial DNA of the ant Tetraponera rufoniger: sequence divergence in Hymenoptera may be associated with nucleotide content

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Phylogenetic signals and ecotoxicological responses: potential implications for aquatic biomonitoring

8 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

DNA barcoding should accompany taxonomy - the case of Cerebratulus spp (Nemertea).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

Effects of sediment quality on macroinvertebrates in the Sunraysia region of the Murray-Darling Rivers, Australia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

Utility of DNA taxonomy and barcoding for the inference of larval community structure in morphologically cryptic Chironomus (Diptera) species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

Discrimination of Cricotopus species (Diptera: Chironomidae) by DNA barcoding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

Evolution and phylogenetic utility of CAD (rudimentary) among Mesozoic-aged Eremoneuran Diptera (Insecta).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

A combination of molecular and morphological approaches resolves species in the taxonomically difficult genus Procladius Skuse (Diptera: Chironomidae) despite high intra-specific morphological variation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

Universal primers for fluorescent labelling of PCR fragments--an efficient and cost-effective approach to genotyping by fluorescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1742-9994-10-45

DNA taxonomy of a neglected animal phylum: an unexpected diversity of tardigrades.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Identifying chironomids (Diptera: Chironomidae) for biological monitoring with PCR-RFLP.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750358

Molecular barcodes for soil nematode identification

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23919569

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1742-9994-10-45

1 reference

Dimensions Publication ID

5 August 2017

0 references

1 reference

5 August 2017

1 reference