(Q34916668)

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Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease

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Europe PubMed Central

PubMed publication ID

5 August 2017

Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease (English)

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Europe PubMed Central

PubMed publication ID

5 August 2017

Pseudomonas syringae

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Pseudomonas syringae

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Frederic Bertels

3

object named as

Frederic Bertels

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Europe PubMed Central

PubMed publication ID

5 August 2017

15

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Paul B Rainey

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Europe PubMed Central

PubMed publication ID

5 August 2017

Honour C McCann

1

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Honour C McCann

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5 August 2017

author name string

Erik H A Rikkerink

2

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Europe PubMed Central

PubMed publication ID

5 August 2017

Mark Fiers

4

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Europe PubMed Central

PubMed publication ID

5 August 2017

Ashley Lu

5

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

Jonathan Rees-George

6

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

Mark T Andersen

7

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

Andrew P Gleave

8

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Europe PubMed Central

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5 August 2017

Bernhard Haubold

9

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Europe PubMed Central

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5 August 2017

Mark W Wohlers

10

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Europe PubMed Central

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5 August 2017

David S Guttman

11

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Europe PubMed Central

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5 August 2017

Pauline W Wang

12

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Europe PubMed Central

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5 August 2017

Christina Straub

13

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Europe PubMed Central

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5 August 2017

Joel L Vanneste

14

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5 August 2017

Matthew D Templeton

16

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5 August 2017

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publication date

25 July 2013

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5 August 2017

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Europe PubMed Central

PubMed publication ID

5 August 2017

9

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Europe PubMed Central

PubMed publication ID

5 August 2017

7

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

e1003503

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Europe PubMed Central

PubMed publication ID

5 August 2017

copyright license

Creative Commons Attribution 4.0 International

25 July 2013

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April 2022 Public Data File from Crossref

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MUMmer

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Pseudomonas syringae pv. actinidiae from recent outbreaks of kiwifruit bacterial canker belong to different clones that originated in China

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

A population genomics perspective on the emergence and adaptation of new plant pathogens in agro-ecosystems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Ketoglutarate transport protein KgtP is secreted through the type III secretion system and contributes to virulence in Xanthomonas oryzae pv. oryzae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

The Molecular Basis of Host Specialization in Bean Pathovars of Pseudomonas syringae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Genome sequence of the biocontrol strain Pseudomonas fluorescens F113.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Identification of innate immunity elicitors using molecular signatures of natural selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

A bacterial acetyltransferase destroys plant microtubule networks and blocks secretion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Pathogen effectors target Arabidopsis EDS1 and alter its interactions with immune regulators.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Pseudomonas syringae pv. actinidiae draft genomes comparison reveal strain-specific features involved in adaptation and virulence to Actinidia species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

The influence of the accessory genome on bacterial pathogen evolution

1 reference

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8 July 2018

The making of a new pathogen: insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Evidence for several waves of global transmission in the seventh cholera pandemic

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Effector-triggered immunity blocks pathogen degradation of an immunity-associated vesicle traffic regulator in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Prevalence and significance of plasmid maintenance functions in the virulence plasmids of pathogenic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Improving immunity in crops: new tactics in an old game

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Alignment-free detection of local similarity among viral and bacterial genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Whole-genome and chromosome evolution associated with host adaptation and speciation of the wheat pathogen Mycosphaerella graminicola

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Scaffolding pre-assembled contigs using SSPACE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Maladaptation in wild populations of the generalist plant pathogen Pseudomonas syringae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Transcriptome analysis of the phytobacterium Xylella fastidiosa growing under xylem-based chemical conditions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Detecting genomic islands using bioinformatics approaches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Expanding the paradigms of plant pathogen life history and evolution of parasitic fitness beyond agricultural boundaries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

The majority of the type III effector inventory of Pseudomonas syringae pv. tomato DC3000 can suppress plant immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Sequence-based prediction of type III secreted proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Mqo, a tricarboxylic acid cycle enzyme, is required for virulence of Pseudomonas syringae pv. tomato strain DC3000 on Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

The Bacterial Species Challenge: Making Sense of Genetic and Ecological Diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

The origins of plant pathogens in agro-ecosystems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

RNaseE and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Closing the circle on the discovery of genes encoding Hrp regulon members and type III secretion system effectors in the genomes of three model Pseudomonas syringae strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Yersinia YopJ acetylates and inhibits kinase activation by blocking phosphorylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

A simple and robust statistical test for detecting the presence of recombination

1 reference

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8 July 2018

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Application of phylogenetic networks in evolutionary studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Non-classical protein secretion in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Plant disease: a threat to global food security

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

An algorithm for progressive multiple alignment of sequences with insertions

1 reference

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8 July 2018

Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5

1 reference

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8 July 2018

Automated generation of heuristics for biological sequence comparison

1 reference

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8 July 2018

The ecology and genetics of microbial diversity.

1 reference

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8 July 2018

Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Pseudomonas syringae type III secretion system targeting signals and novel effectors studied with a Cya translocation reporter

1 reference

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8 July 2018

Two simple media for the demonstration of pyocyanin and fluorescin

1 reference

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8 July 2018

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3723570

8 July 2018

Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

1 reference

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8 July 2018

Recombination and the population structures of bacterial pathogens

1 reference

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8 July 2018

The foot-and-mouth epidemic in Great Britain: pattern of spread and impact of interventions

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8 July 2018

Changing patterns of infectious disease

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8 July 2018

The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity

1 reference

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8 July 2018

Bovine spongiform encephalopathy (BSE): causes and consequences of a common source epidemic

1 reference

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8 July 2018

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

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8 July 2018

Split decomposition: a new and useful approach to phylogenetic analysis of distance data

1 reference

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8 July 2018

On the number of segregating sites in genetical models without recombination

1 reference

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8 July 2018

Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation

1 reference

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21 January 2018

Pseudomonas syringae pv. actinidiae: a re-emerging, multi-faceted, pandemic pathogen

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003503

21 January 2018

Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens

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21 January 2018

Xanthomonas citri: breaking the surface.

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21 January 2018

Exposure to host resistance mechanisms drives evolution of bacterial virulence in plants

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21 January 2018

Pseudomonas syringae type III effector HopZ1 targets a host enzyme to suppress isoflavone biosynthesis and promote infection in soybean.

1 reference

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21 January 2018

Phylogenetic relationships among global populations of Pseudomonas syringae pv. actinidiae

1 reference

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26 October 2018

Statistical tests for detecting gene conversion.

1 reference

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26 October 2018

Plants have a sensitive perception system for the most conserved domain of bacterial flagellin

1 reference

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12 December 2020

based on heuristic

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Identifiers

10.1371/JOURNAL.PPAT.1003503

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

ResearchGate publication ID

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