(Q34977023)

5 August 2017

The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome (English)

1 reference

5 August 2017

Nathaniel Robert Street

2

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Andreas Sjödin

object named as

Andreas Sjödin

1

0 references

Stefan Jansson

object named as

Stefan Jansson

5

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author name string

Göran Sandberg

3

1 reference

PubMed ID

19383103

5 August 2017

Petter Gustafsson

4

1 reference

PubMed ID

19383103

5 August 2017

language of work or name

English

0 references

publication date

1 June 2009

1 reference

5 August 2017

1 reference

5 August 2017

182

1 reference

5 August 2017

1013-1025

1 reference

5 August 2017

4

1 reference

A transcriptional timetable of autumn senescence

5 August 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Poplar genome sequence: functional genomics in an ecologically dominant plant species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A unique program for cell death in xylem fibers of Populus stem

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Comparative analysis of orthologous cellulose synthase promoters from Arabidopsis, Populus and Eucalyptus: evidence of conserved regulatory elements in angiosperms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

ViroBLAST: a stand-alone BLAST web server for flexible queries of multiple databases and user's datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Environmental and hormonal regulation of the activity-dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

BioMAJ: a flexible framework for databanks synchronization and processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Pfam: clans, web tools and services

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

VISTA: computational tools for comparative genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Protease gene families in Populus and Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A transcriptional roadmap to wood formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Nucleotide polymorphism and linkage disequilibrium within and among natural populations of European aspen (Populus tremula L., Salicaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Gene expression and protein length influence codon usage and rates of sequence evolution in Populus tremula

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Clinal variation in phyB2, a candidate gene for day-length-induced growth cessation and bud set, across a latitudinal gradient in European aspen (Populus tremula).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Genetical genomics: the added value from segregation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Populus: a model system for plant biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

KEGG for linking genomes to life and the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

KEGG: kyoto encyclopedia of genes and genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

From genomics to chemical genomics: new developments in KEGG

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Abundantly and rarely expressed Lhc protein genes exhibit distinct regulation patterns in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

The poplar root transcriptome: analysis of 7000 expressed sequence tags

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Web-based analysis of the mouse transcriptome using Genevestigator

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

VISTA : visualizing global DNA sequence alignments of arbitrary length

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A genomic approach to investigate developmental cell death in woody tissues of Populus trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A toolkit for analysing large-scale plant small RNA datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Visualization-based discovery and analysis of genomic aberrations in microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Accurate detection of aneuploidies in array CGH and gene expression microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

SynBrowse: a synteny browser for comparative sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of [...]

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen (Populus tremuloides) altered in phenylpropanoid metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A molecular timetable for apical bud formation and dormancy induction in poplar.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A high-resolution transcript profile across the wood-forming meristem of poplar identifies potential regulators of cambial stem cell identity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Highly specific gene silencing by artificial microRNAs in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Global expression profiling in leaves of free-growing aspen

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Automated generation of heuristics for biological sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

The generic genome browser: a building block for a model organism system database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A Populus EST resource for plant functional genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A cross-species transcriptomics approach to identify genes involved in leaf development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

The genetics and genomics of the drought response in Populus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

The COG database: an updated version includes eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Populus: arabidopsis for forestry. Do we need a model tree?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Gene ontology: tool for the unification of biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

SynView: a GBrowse-compatible approach to visualizing comparative genome data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Extending genomics to natural communities and ecosystems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

FlyBase: integration and improvements to query tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

A dense linkage map of hybrid cottonwood (Populus fremontii x P. angustifolia) contributes to long-term ecological research and comparison mapping in a model forest tree.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Genetic transformation of Populus trichocarpa genotype Nisqually-1: a functional genomic tool for woody plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

OPLS discriminant analysis: combining the strengths of PLS-DA and SIMCA classification

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

Genomics and forest biology: Populus emerges as the perennial favorite

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

UPSC-BASE -Populustranscriptomics online

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-8137.2009.02807.X

10.1111/J.1469-8137.2009.02807.X

21 January 2018

Identifiers

DOI

1 reference

5 August 2017

1 reference

PubMed ID

19383103