(Q34977650)

5 August 2017

title

Arabidopsis Polycomb Repressive Complex 2 binding sites contain putative GAGA factor binding motifs within coding regions of genes (English)

1 reference

5 August 2017

7

Elizabeth S Dennis

1 reference

ORCID Public Data File 2021

5 August 2017

1 reference

Masumi Robertson

4

object named as

Masumi Robertson

1 reference

5 August 2017

Weiwei Deng

1

1 reference

5 August 2017

Diana M Buzas

2

1 reference

5 August 2017

Hua Ying

3

1 reference

5 August 2017

Jennifer Taylor

5

1 reference

5 August 2017

William James Peacock

6

1 reference

5 August 2017

Chris Helliwell

8

1 reference

5 August 2017

language of work or name

English

0 references

publication date

30 August 2013

1 reference

5 August 2017

1 reference

5 August 2017

volume

14

1 reference

5 August 2017

page(s)

593

1 reference

describes a project that uses

5 August 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-14-593

0 references

cites work

Arabidopsis MSI1 connects LHP1 to PRC2 complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Occupying Chromatin: Polycomb Mechanisms for Getting to Genomic Targets, Stopping Transcriptional Traffic, and Staying Put

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

The ASYMMETRIC LEAVES complex maintains repression of KNOX homeobox genes via direct recruitment of Polycomb-repressive complex2.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Natural variation of H3K27me3 distribution between two Arabidopsis accessions and its association with flanking transposable elements.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Memories from the polycomb group proteins.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

The Polycomb complex PRC2 and its mark in life

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Silencing chromatin: comparing modes and mechanisms

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Vernalization-mediated epigenetic silencing by a long intronic noncoding RNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Long noncoding RNA as modular scaffold of histone modification complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

A region of the human HOXD cluster that confers polycomb-group responsiveness

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

2-D structure of the A region of Xist RNA and its implication for PRC2 association

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Recruitment of polycomb group complexes and their role in the dynamic regulation of cell fate choice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Mechanisms of polycomb gene silencing: knowns and unknowns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

A vertebrate Polycomb response element governs segmentation of the posterior hindbrain

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Diversity of Polycomb group complexes in plants: same rules, different players?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Functional anatomy of polycomb and trithorax chromatin landscapes in Drosophila embryos

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Genic and global functions for Paf1C in chromatin modification and gene expression in Arabidopsis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Polycomb group and trithorax group proteins in Arabidopsis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

The Arabidopsis thaliana vernalization response requires a polycomb-like protein complex that also includes VERNALIZATION INSENSITIVE 3.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Polycomb response elements and targeting of Polycomb group proteins in Drosophila.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Genome-wide analysis of Polycomb targets in Drosophila melanogaster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Interaction of Polycomb-group proteins controlling flowering in Arabidopsis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Cytoscape: a software environment for integrated models of biomolecular interaction networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Immunoprecipitation of native chromatin: NChIP.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

The VERNALIZATION 2 gene mediates the epigenetic regulation of vernalization in Arabidopsis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3766684

Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis.

8 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-593

Arabidopsis REF6 is a histone H3 lysine 27 demethylase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-593

Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-593

Transcription-dependence of histone H3 lysine 27 trimethylation at the Arabidopsis polycomb target gene FLC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-593

Polycomb group protein complexes exchange rapidly in living Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-593

The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-593

Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24001316

12 December 2020

inferred from PubMed ID database lookup

Direct repression of KNOX loci by the ASYMMETRIC LEAVES1 complex of Arabidopsis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24001316

12 December 2020

inferred from PubMed ID database lookup

Heterogeneity of Arabidopsis core promoters revealed by high-density TSS analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24001316

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2164-14-593

1 reference

Dimensions Publication ID

5 August 2017

0 references

1 reference

5 August 2017

1 reference