(Q34984545)

English

Aquifex aeolicus tRNA (N2,N2-guanine)-dimethyltransferase (Trm1) catalyzes transfer of methyl groups not only to guanine 26 but also to guanine 27 in tRNA.

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scholarly article

1 reference

Europe PubMed Central

5 August 2017

Aquifex aeolicus tRNA (N2,N2-guanine)-dimethyltransferase (Trm1) catalyzes transfer of methyl groups not only to guanine 26 but also to guanine 27 in tRNA. (English)

1 reference

Europe PubMed Central

5 August 2017

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Aquifex aeolicus

object named as

Aquifex aeolicus

1 reference

based on heuristic

inferred from title

object named as

Tsutomu Suzuki

11

0 references

Shigeyuki Yokoyama

object named as

Shigeyuki Yokoyama

7

0 references

author name string

Takako Awai

1

1 reference

Europe PubMed Central

5 August 2017

Satoshi Kimura

2

1 reference

Europe PubMed Central

5 August 2017

Chie Tomikawa

3

1 reference

Europe PubMed Central

5 August 2017

Anna Ochi

4

1 reference

Europe PubMed Central

5 August 2017

Ihsanawati

5

1 reference

Europe PubMed Central

5 August 2017

Yoshitaka Bessho

6

1 reference

Europe PubMed Central

5 August 2017

Satoshi Ohno

8

1 reference

Europe PubMed Central

5 August 2017

Kazuya Nishikawa

9

1 reference

Europe PubMed Central

5 August 2017

Takashi Yokogawa

10

1 reference

Europe PubMed Central

5 August 2017

Hiroyuki Hori

12

1 reference

Europe PubMed Central

5 August 2017

language of work or name

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publication date

2 June 2009

1 reference

Europe PubMed Central

5 August 2017

Journal of Biological Chemistry

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Europe PubMed Central

5 August 2017

284

1 reference

Europe PubMed Central

5 August 2017

31

1 reference

Europe PubMed Central

5 August 2017

20467-20478

1 reference

Europe PubMed Central

5 August 2017

Common thiolation mechanism in the biosynthesis of tRNA thiouridine and sulphur-containing cofactors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

RNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Crystal structure of tRNA N2,N2-guanosine dimethyltransferase Trm1 from Pyrococcus horikoshii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Mass spectrometric identification and characterization of RNA-modifying enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Archease from Pyrococcus abyssi improves substrate specificity and solubility of a tRNA m5C methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The substrate specificity of tRNA (m1G37) methyltransferase (TrmD) from Aquifex aeolicus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Molecular signatures in protein sequences that are characteristics of the phylum Aquificae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

MODOMICS: a database of RNA modification pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Temperature-dependent biosynthesis of 2-thioribothymidine of Thermus thermophilus tRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Substrate tRNA recognition mechanism of tRNA (m7G46) methyltransferase from Aquifex aeolicus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

N2-methylation of guanosine at position 10 in tRNA is catalyzed by a THUMP domain-containing, S-adenosylmethionine-dependent methyltransferase, conserved in Archaea and Eukaryota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

A primordial RNA modification enzyme: the case of tRNA (m1A) methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Many paths to methyltransfer: a chronicle of convergence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The yggH Gene of Escherichia coli Encodes a tRNA (m 7 G46) Methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Aquifex aeolicus tRNA (Gm18) methyltransferase has unique substrate specificity. TRNA recognition mechanism of the enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: implication for tRNA sorting mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga–Flavobacterium–Bacteroides division

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The human tRNA(m(2)(2)G(26))dimethyltransferase: functional expression and characterization of a cloned hTRM1 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The tRNA N2,N2-dimethylguanosine-26 methyltransferase encoded by gene trm1 increases efficiency of suppression of an ochre codon in Schizosaccharomyces pombe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Multisite-specific tRNA:m5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: identification of the gene and substrate specificity of the enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Characterisation and enzymatic properties of tRNA(guanine 26, N (2), N (2))-dimethyltransferase (Trm1p) from Pyrococcus furiosus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

ESPript: analysis of multiple sequence alignments in PostScript

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Caenorhabditis elegans ZC376.5 encodes a tRNA (m2/2G(26))dimethyltransferance in which (246)arginine is important for the enzyme activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Transfer RNA modification enzymes from Pyrococcus furiosus: detection of the enzymatic activities in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The RNA Modification Database: 1999 update

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The tRNA(guanine-26,N2-N2) methyltransferase (Trm1) from the hyperthermophilic archaeon Pyrococcus furiosus: cloning, sequencing of the gene and its expression in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Enzymatic formation of modified nucleosides in tRNA: dependence on tRNA architecture.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

A cell-free plant extract for accurate pre-tRNA processing, splicing and modification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

A human and a plant intron-containing tRNATyr gene are both transcribed in a HeLa cell extract but spliced along different pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Purification, structure, and properties of Escherichia coli tRNA pseudouridine synthase I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

A single tRNA (guanine)-methyltransferase from Tetrahymena with both mono- and di-methylating activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Isolation and characterization of the TRM1 locus, a gene essential for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNA in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Identity elements for N2-dimethylation of guanosine-26 in yeast tRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Heat-induced stability of tRNA from an extreme thermophile, Thermus thermophilus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Purification and characterization of two tRNA-(guanine)-methyltransferases from rat liver

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

8 July 2018

Identity elements required for enzymatic formation of N2,N2-dimethylguanosine from N2-monomethylated derivative and its possible role in avoiding alternative conformations in archaeal tRNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

THUMP from archaeal tRNA:m22G10 methyltransferase, a genuine autonomously folding domain

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

The C-terminal region of thermophilic tRNA (m7G46) methyltransferase (TrmB) stabilizes the dimer structure and enhances fidelity of methylation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

Stabilization of tRNA (mG37) methyltransferase [TrmD] from Aquifex aeolicus by an intersubunit disulfide bond formation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

A phylogenetic analysis of Aquifex pyrophilus

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.020024

21 January 2018

Halobacterium volcanii tRNAs. Identification of 41 tRNAs covering all amino acids, and the sequences of 33 class I tRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2742811

26 October 2018

Bioinformatic analyses of the tRNA: (guanine 26, N2,N2)-dimethyltransferase (Trm1) family

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies on microbial ribonucleic acid. IV. Two mutants of Saccharomyces cerevisiae lacking N-2-dimethylguanine in soluble ribonucleic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequence specificities of guanylate residue-specific tRNA methylases from rat liver

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nucleotide sequence of tyrosine tRNAQ* psi A from bovine liver

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural elements in yeast tRNAs required for homologous modification of guanosine-26 into dimethylguanosine-26 by the yeast Trm1 tRNA-modifying enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Batchwise purification of specific tRNAs by a solid-phase DNA probe

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/19491098

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M109.020024

1 reference

Europe PubMed Central

5 August 2017

release_wmehm4t5ijdi5evjlvbl5ppuyy

1 reference

https://api.fatcat.wiki/v0/release/wmehm4t5ijdi5evjlvbl5ppuyy

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

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