(Q34992074)

5 August 2017

title

BioC: a minimalist approach to interoperability for biomedical text processing (English)

1 reference

5 August 2017

0 references

6

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5 August 2017

11

1 reference

5 August 2017

Fabio Rinaldi

9

0 references

Manabu Torii

Manabu Torii

10

0 references

Karin Verspoor

Karin Verspoor

12

0 references

Yifan Peng

Yifan Peng

8

0 references

Paolo Ciccarese

3

Paolo Ciccarese

1 reference

5 August 2017

15

W John Wilbur

1 reference

5 August 2017

5

Martin Krallinger

1 reference

5 August 2017

14

Cathy H Wu

1 reference

5 August 2017

13

Thomas C Wiegers

1 reference

5 August 2017

7

Zhiyong Lu

1 reference

5 August 2017

1

Donald C Comeau

1 reference

5 August 2017

Kevin Bretonnel Cohen

4

Kevin Bretonnel Cohen

1 reference

5 August 2017

Rezarta Islamaj Dogan

2

Rezarta Islamaj Doğan

1 reference

5 August 2017

publication date

18 September 2013

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5 August 2017

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5 August 2017

volume

2013

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5 August 2017

page(s)

bat064

1 reference

Using the OntoGene pipeline for the triage task of BioCreative 2012.

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

BioCreative-2012 virtual issue

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

The eFIP system for text mining of protein interaction networks of phosphorylated proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Collaborative biocuration--text-mining development task for document prioritization for curation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Biocuration workflows and text mining: overview of the BioCreative 2012 Workshop Track II

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

The Comparative Toxicogenomics Database: update 2013.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

SR4GN: a species recognition software tool for gene normalization

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Open semantic annotation of scientific publications using DOMEO.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Using ODIN for a PharmGKB revalidation experiment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

BioLemmatizer: a lemmatization tool for morphological processing of biomedical text

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Assessment of NER solutions against the first and second CALBC Silver Standard Corpus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Overview of the BioCreative III Workshop

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Machine learning with naturally labeled data for identifying abbreviation definitions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

An open annotation ontology for science on web 3.0

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

CALBC silver standard corpus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Investigating heterogeneous protein annotations toward cross-corpora utilization

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

U-Compare: share and compare text mining tools with UIMA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Introducing meta-services for biomedical information extraction

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Abbreviation definition identification based on automatic precision estimates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Comparative analysis of five protein-protein interaction corpora

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

BANNER: an executable survey of advances in biomedical named entity recognition.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Corpus refactoring: a feasibility study

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

Overview of BioCreAtIvE: critical assessment of information extraction for biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

iProLINK: an integrated protein resource for literature mining

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

MedPost: a part-of-speech tagger for bioMedical text

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

A simple algorithm for identifying abbreviation definitions in biomedical text.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

OntoGene in BioCreative II.5.

8 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAT064

Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3889917

An online literature mining tool for protein phosphorylation

26 October 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAT064

21 January 2018

Identifiers

DOI

10.1093/DATABASE/BAT064

1 reference

5 August 2017

1 reference

5 August 2017

1 reference