(Q34996783)

5 August 2017

1 reference

title

Analysis of substrate recognition by the ribonucleoprotein endonuclease RNase P. (English)

1 reference

ribonucleoprotein complex

5 August 2017

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Eric L Christian

1

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5 August 2017

Nathan H Zahler

series ordinal

2

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5 August 2017

Nicholas M Kaye

series ordinal

3

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5 August 2017

Michael E Harris

series ordinal

4

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5 August 2017

1 November 2002

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5 August 2017

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5 August 2017

28

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5 August 2017

307-322

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5 August 2017

3

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Ribonuclease P: a ribonucleoprotein enzyme

5 August 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Interaction of RNase P from Escherichia coli with pseudoknotted structures in viral RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Precursor of C4 antisense RNA of bacteriophages P1 and P7 is a substrate for RNase P of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Ribonuclease E provides substrates for ribonuclease P-dependent processing of a polycistronic mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Evolutionary variation in bacterial RNase P RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Multiple substrate binding sites in the ribozyme from Bacillus subtilis RNase P.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Interaction of the 3'-end of tRNA with ribonuclease P RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Probing of tertiary interactions in RNA: 2'-hydroxyl-base contacts between the RNase P RNA and pre-tRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Recognition of the T stem-loop of a pre-tRNA substrate by the ribozyme from Bacillus subtilis ribonuclease P

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mapping the active site of ribonuclease P RNA using a substrate containing a photoaffinity agent.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Circularly permuted tRNAs as specific photoaffinity probes of ribonuclease P RNA structure.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Model substrates for an RNA enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Substrate recognition by RNase P and by the catalytic M1 RNA: identification of possible contact points in pre-tRNAs.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Nucleotides in precursor tRNAs that are required intact for catalysis by RNase P RNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

E. coli RNAase P has a required RNA component

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Evolutionary perspective on the structure and function of ribonuclease P, a ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Ribonuclease P protein structure: evolutionary origins in the translational apparatus

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The structure of ribonuclease P protein from Staphylococcus aureus reveals a unique binding site for single-stranded RNA

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Bacterial ribonuclease P holoenzyme crosslinking analysis reveals protein interaction sites on the RNA subunit

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mapping RNA-protein interactions in ribonuclease P from Escherichia coli using disulfide-linked EDTA-Fe

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Role of the protein moiety of ribonuclease P, a ribonucleoprotein enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Protein component of Bacillus subtilis RNase P specifically enhances the affinity for precursor-tRNAAsp

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Gel retardation analysis of the interaction between C5 protein and M1 RNA in the formation of the ribonuclease P holoenzyme from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mapping in three dimensions of regions in a catalytic RNA protected from attack by an Fe(II)-EDTA reagent.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Modular construction for function of a ribonucleoprotein enzyme: the catalytic domain of Bacillus subtilis RNase P complexed with B. subtilis RNase P protein

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Recognition of a pre-tRNA substrate by the Bacillus subtilis RNase P holoenzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5' leader sequence of pre-tRNAAsp.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Saccharomyces cerevisiae nuclear ribonuclease P: structure and function

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

1 reference

7 January 2021

A kinetic mechanism for cleavage of precursor tRNA(Asp) catalyzed by the RNA component of Bacillus subtilis ribonuclease P

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Magnesium ions are required by Bacillus subtilis ribonuclease P RNA for both binding and cleaving precursor tRNAAsp

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Multiple magnesium ions in the ribonuclease P reaction mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Transient kinetic approaches to enzyme mechanisms

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The isotope trapping method: desorption rates of productive E.S complexes.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Selection of circularly permuted ribozymes from Bacillus subtilis RNAse P by substrate binding

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Gel retardation analysis of E. coli M1 RNA-tRNA complexes

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Recognition of the 5' leader and the acceptor stem of a pre-tRNA substrate by the ribozyme from Bacillus subtilis RNase P.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Kinetics and thermodynamics of the RNase P RNA cleavage reaction: analysis of tRNA 3'-end variants.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Kinetic and thermodynamic analysis of RNA-protein interactions in the RNase P holoenzyme from Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Differential role of the intermolecular base-pairs G292-C(75) and G293-C(74) in the reaction catalyzed by Escherichia coli RNase P RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

47 A centrifuged-column procedure for the measurement of ligand binding by beef heart F1

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Rp-phosphorothioate modifications in RNase P RNA that interfere with tRNA binding.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Distinct modes of mature and precursor tRNA binding to Escherichia coli RNase P RNA revealed by NAIM analyses

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Purine N7 groups that are crucial to the interaction of Escherichia coli rnase P RNA with tRNA

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Guanosine 2-NH2 groups of Escherichia coli RNase P RNA involved in intramolecular tertiary contacts and direct interactions with tRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Identification of individual nucleotides in the bacterial ribonuclease P ribozyme adjacent to the pre-tRNA cleavage site by short-range photo-cross-linking

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Fluorescence resonance energy transfer as a structural tool for nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Protection from chemical modification of nucleotides in complexes of M1 RNA, the catalytic subunit of RNase P from E coli, and tRNA precursors

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Lead-ion-induced cleavage of RNase P RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Residues in Escherichia coli RNase P RNA important for cleavage site selection and divalent metal ion binding.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The cleavage step of ribonuclease P catalysis is determined by ribozyme-substrate interactions both distal and proximal to the cleavage site

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Evidence for helical unwinding of an RNA substrate by the RNA enzyme RNase P: use of an interstrand disulfide crosslink in substrate.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Probing the structure of RNAs in solution

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Interaction of structural modules in substrate binding by the ribozyme from Bacillus subtilis RNase P.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Differential evolution of substrates for an RNA enzyme in the presence and absence of its protein cofactor.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Visualizing the higher order folding of a catalytic RNA molecule

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Defining the inside and outside of a catalytic RNA molecule

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

A new theoretical index of biochemical reactivity combining steric and electrostatic factors. An application to yeast tRNAPhe

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The track of the pre-tRNA 5' leader in the ribonuclease P ribozyme-substrate complex

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Specific interactions in RNA enzyme-substrate complexes

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Cleavage site selection by M1 RNA the catalytic subunit of Escherichia coli RNase P, is influenced by pH

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Use of circular permutation and end modification to position photoaffinity probes for analysis of RNA structure

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mapping RNA-protein interactions in ribonuclease P from Escherichia coli using electron paramagnetic resonance spectroscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mapping staphylococcal nuclease conformation using an EDTA-Fe derivative attached to genetically engineered cysteine residues.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Transfer of oxygen from an artificial protease to peptide carbon during proteolysis

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mapping the structure of a non-native state of staphylococcal nuclease

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Directed cleavage of RNA with protein-tethered EDTA-Fe

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Multiple binding modes of substrate to the catalytic RNA subunit of RNase P from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Nucleotide analog interference mapping

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Modification interference approach to detect ribose moieties important for the optimal activity of a ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Identification of adenosine functional groups involved in substrate binding by the ribonuclease P ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Potential contact sites between the protein and RNA subunit in the Bacillus subtilis RNase P holoenzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Reconstitution of enzymatic activity from fragments of M1 RNA

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Gap-scan deletion analysis of Bacillus subtilis RNase P RNA

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

A mutant T7 RNA polymerase as a DNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Analysis of the role of phosphate oxygens in the group I intron from Tetrahymena

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Recent approaches to probe functional groups in ribonuclease P RNA by modification interference

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Determinants of Escherichia coli RNase P cleavage site selection: a detailed in vitro and in vivo analysis.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Mutational analysis of the joining regions flanking helix P18 in E. coli RNase P RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Analysis of the functional role of conserved residues in the protein subunit of ribonuclease P from Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Helix P4 is a divalent metal ion binding site in the conserved core of the ribonuclease P ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Thiophilic metal ion rescue of phosphorothioate interference within the Tetrahymena ribozyme P4-P6 domain

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Cleavage of tRNA precursors by the RNA subunit of E. coli ribonuclease P (M1 RNA) is influenced by 3'-proximal CCA in the substrates

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

NMR analysis of tRNA acceptor stem microhelices: discriminator base change affects tRNA conformation at the 3' end

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

The NMR structure of 31mer RNA domain of Escherichia coli RNase P RNA using its non-uniformly deuterium labelled counterpart [the 'NMR-window' concept]

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Several regions of a tRNA precursor determine the Escherichia coli RNase P cleavage site.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Identification by modification-interference of purine N-7 and ribose 2'-OH groups critical for catalysis by bacterial ribonuclease P.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

NAIM and site-specific functional group modification analysis of RNase P RNA: magnesium dependent structure within the conserved P1-P4 multihelix junction contributes to catalysis.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

Exploring the minimal substrate requirements for trans-cleavage by RNase P holoenzymes from Escherichia coli and Bacillus subtilis.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

VMD: visual molecular dynamics

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900238-4

7 January 2021

10.1016/S1046-2023(02)00238-4

Identifiers

DOI

1 reference

5 August 2017

1 reference