(Q34046346)

30 July 2017

1 reference

title

Fluorescence resonance energy transfer as a structural tool for nucleic acids (English)

1 reference

30 July 2017

D M Lilley

1

1 reference

PubMed ID

11006537

30 July 2017

T J Wilson

series ordinal

2

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30 July 2017

1 October 2000

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Current Opinion in Chemical Biology

30 July 2017

1 reference

30 July 2017

4

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30 July 2017

507-517

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30 July 2017

5

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Energy transfer: a spectroscopic ruler

30 July 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

17 The use of singlet-singlet energy transfer to study macromolecular assemblies

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Zwischenmolekulare Energiewanderung und Fluoreszenz

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Fluorescence resonance energy transfer and nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Fluorescence resonance energy transfer analysis of the structure of the four-way DNA junction

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Crystal structure of an 82-nucleotide RNA-DNA complex formed by the 10-23 DNA enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Crystal structure of a DNA Holliday junction

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

The Holliday junction in an inverted repeat DNA sequence: sequence effects on the structure of four-way junctions

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

The Holliday junction is finally seen with crystal clarity

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

The solution structure of the four-way DNA junction at low-salt conditions: a fluorescence resonance energy transfer analysis

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Ion-induced folding of the hammerhead ribozyme: a fluorescence resonance energy transfer study

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Effect of additional unpaired bases on the stability of three-way DNA junctions studied by fluorescence techniques

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Conformational distributions of a four-way DNA junction revealed by time-resolved fluorescence resonance energy transfer.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Determination of DNA helical handedness by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB). A nomenclature of junctions and branchpoints in nucleic acids. Recommendations 1994.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Global structure of three-way DNA junctions with and without additional unpaired bases: a fluorescence resonance energy transfer analysis

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Conformational flexibility of three-way DNA junctions containing unpaired nucleotides.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Orientation factor in steady-state and time-resolved resonance energy transfer measurements

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Cyanine dyes with high absorption cross section as donor chromophores in energy transfer primers

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Folding of the hairpin ribozyme in its natural conformation achieves close physical proximity of the loops

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Location of cyanine-3 on double-stranded DNA: importance for fluorescence resonance energy transfer studies

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Flow birefringence of persistence length deoxyribonucleic acid. Hydrodynamic properties, optical anisotropy, and hydration shell anisotropy

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Effect of ethidium on the torsion constants of linear and supercoiled DNAs.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Fluorescence characteristics of 5-carboxytetramethylrhodamine linked covalently to the 5' end of oligonucleotides: multiple conformers of single-stranded and double-stranded dye-DNA complexes

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Distance distribution in a dye-linked oligonucleotide determined by time-resolved fluorescence energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Donor-acceptor distance distributions in a double-labeled fluorescent oligonucleotide both as a single strand and in duplexes

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Detection of nucleic acid hybridization by nonradiative fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Kinetic studies by fluorescence resonance energy transfer employing a double-labeled oligonucleotide: hybridization to the oligonucleotide complement and to single-stranded DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Multicolor molecular beacons for allele discrimination

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Comparison of fluorescence energy transfer primers with different donor-acceptor dye combinations.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Determination of interactions between structured nucleic acids by fluorescence resonance energy transfer (FRET): selection of target sites for functional nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Intracellular oligonucleotide hybridization detected by fluorescence resonance energy transfer (FRET).

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

The helix-coil transition of DNA duplexes and hairpins observed by multiple fluorescence parameters

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Hybridization of Peptide Nucleic Acid†

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

A quantitative method for evaluating the stabilities of nucleic acids

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Binding of U1A protein to the 3' untranslated region of its pre-mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

DNA curvature in solution measured by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

A nanomechanical device based on the B-Z transition of DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Fluorescence energy transfer between two triple helix-forming oligonucleotides bound to duplex DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Direct measurement of thermodynamic and kinetic parameters of DNA triple helix formation by fluorescence spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

DNA tetraplex formation studied with fluorescence resonance energy transfer.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Fluorescence energy transfer as a probe for tetraplex formation: the i-motif

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Crossover isomer bias is the primary sequence-dependent property of immobilized Holliday junctions

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Global structure of four-way RNA junctions studied using fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Folding of the four-way RNA junction of the hairpin ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Structure, folding and catalysis of the small nucleolytic ribozymes

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Simple RNA enzymes with new and highly specific endoribonuclease activities

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

A three-dimensional model for the hammerhead ribozyme based on fluorescence measurements

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Three-dimensional structure of a hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Ionic interactions and the global conformations of the hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

RNA folding and misfolding of the hammerhead ribozyme.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

RNA catalytic properties of the minimum (-)sTRSV sequence

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Tertiary structure formation in the hairpin ribozyme monitored by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Structure and activity of the hairpin ribozyme in its natural junction conformation: effect of metal ions

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

The influence of junction conformation on RNA cleavage by the hairpin ribozyme in its natural junction form

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Stability of hairpin ribozyme tertiary structure is governed by the interdomain junction

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Structure of the polyadenylation regulatory element of the human U1A pre-mRNA 3'-untranslated region and interaction with the U1A protein

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Determination of the NMR structure of the complex between U1A protein and its RNA polyadenylation inhibition element

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Severe axial bending of RNA induced by the U1A binding element present in the 3' untranslated region of the U1A mRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Real time kinetics of restriction endonuclease cleavage monitored by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Single-turnover kinetics of helicase-catalyzed DNA unwinding monitored continuously by fluorescence energy transfer.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Kinetic mechanism for the sequential binding of two single-stranded oligodeoxynucleotides to the Escherichia coli Rep helicase dimer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Clamp subunit dissociation dictates bacteriophage T4 DNA polymerase holoenzyme disassembly

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Sliding clamp of the bacteriophage T4 polymerase has open and closed subunit interfaces in solution

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Use of fluorescence resonance energy transfer to investigate the conformation of DNA substrates bound to the Klenow fragment.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Architecture of a complex between the sigma70 subunit of Escherichia coli RNA polymerase and the nontemplate strand oligonucleotide. Luminescence resonance energy transfer study

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Core RNA polymerase from E. coli induces a major change in the domain arrangement of the sigma 70 subunit

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Co-crystal structure of TBP recognizing the minor groove of a TATA element

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Crystal structure of a yeast TBP/TATA-box complex

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Simultaneous binding and bending of promoter DNA by the TATA binding protein: real time kinetic measurements

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Intermediate species possessing bent DNA are present along the pathway to formation of a final TBP-TATA complex

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

NMR spectroscopic analysis of the DNA conformation induced by the human testis determining factor SRY.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Structural basis for DNA bending by the architectural transcription factor LEF-1

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

A single HMG domain in high-mobility group 1 protein binds to DNAs as small as 20 base pairs containing the major cisplatin adduct

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Specific recognition of cruciform DNA by nuclear protein HMG1.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Protein HU binds specifically to kinked DNA

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Conformational changes of DNA induced by binding of Chironomus high mobility group protein 1a (cHMG1a). Regions flanking an HMG1 box domain do not influence the bend angle of the DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

DNA bending induced by high mobility group proteins studied by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Global structure similarities of intact and nicked DNA complexed with IHF measured in solution by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Structural and Kinetic Studies of a Cisplatin-modified DNA Icosamer Binding to HMG1 Domain B

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Single-molecule fluorescence spectroscopy of enzyme conformational dynamics and cleavage mechanism.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Ligand-induced conformational changes observed in single RNA molecules

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

A Single-Molecule Study of RNA Catalysis and Folding

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

Single-pair fluorescence resonance energy transfer on freely diffusing molecules: observation of Förster distance dependence and subpopulations

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2800%2900124-1

7 January 2021

10.1016/S1367-5931(00)00124-1

Identifiers

DOI

1 reference

30 July 2017

1 reference

PubMed ID

11006537