(Q43203678)

16 November 2017

The influence of junction conformation on RNA cleavage by the hairpin ribozyme in its natural junction form (English)

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16 November 2017

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Thomson JB

1

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16 November 2017

Lilley DM

series ordinal

2

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16 November 2017

language of work or name

English

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publication date

1 February 1999

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16 November 2017

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16 November 2017

5

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16 November 2017

2

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16 November 2017

180-187

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Global structure of four-way RNA junctions studied using fluorescence resonance energy transfer

16 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Tertiary structure formation in the hairpin ribozyme monitored by fluorescence resonance energy transfer

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Metal ions play a passive role in the hairpin ribozyme catalysed reaction

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

In vitro selection of hammerhead ribozymes containing a bulged nucleotide in stem II.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

The loop B domain is physically separable from the loop A domain in the hairpin ribozyme

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Base and sugar requirements for RNA cleavage of essential nucleoside residues in internal loop B of the hairpin ribozyme: implications for secondary structure

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Reconstitution of hairpin ribozyme activity following separation of functional domains

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Essential nucleotide sequences and secondary structure elements of the hairpin ribozyme

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Mutagenesis of the hairpin ribozyme

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

57 Sequencing end-labeled DNA with base-specific chemical cleavages

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

The conformation of chicken, rat and human U1A RNAs in solution

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

RNA catalytic properties of the minimum (-)sTRSV sequence

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Two sequences participating in the autolytic processing of satellite tobacco ringspot virus complementary RNA

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

'Hairpin' catalytic RNA model: evidence for helices and sequence requirement for substrate RNA.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Mixed deoxyribo- and ribo-oligonucleotides with catalytic activity

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Evidence for spontaneous circle formation in the replication of the satellite RNA of tobacco ringspot virus

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Kinetics and thermodynamics of intermolecular catalysis by hairpin ribozymes

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Catalytic properties of hairpin ribozymes derived from Chicory yellow mottle virus and arabis mosaic virus satellite RNAs

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369750

Purine functional groups in essential residues of the hairpin ribozyme required for catalytic cleavage of RNA

15 August 2018

1 reference

12 December 2020

The global folding of four-way helical junctions in RNA, including that in U1 snRNA

1 reference

12 December 2020

Enhanced folding of hairpin ribozymes with replaced domains

1 reference

12 December 2020

Analysis of hairpin ribozyme base mutations in loops 2 and 4 and their effects on cis-cleavage in vitro

1 reference

12 December 2020

Construction of hairpin ribozymes with a three-way junction

1 reference

12 December 2020

A new type of hairpin ribozyme consisting of three domains

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12 December 2020

A unique mechanism for RNA catalysis: the role of metal cofactors in hairpin ribozyme cleavage

1 reference

12 December 2020

An unusual pH-independent and metal-ion-independent mechanism for hairpin ribozyme catalysis

1 reference

12 December 2020

Inter-domain cross-linking and molecular modelling of the hairpin ribozyme

1 reference

12 December 2020

Folding of the hairpin ribozyme in its natural conformation achieves close physical proximity of the loops

1 reference

12 December 2020

Structure and activity of the hairpin ribozyme in its natural junction conformation: effect of metal ions

1 reference

12 December 2020

Novel guanosine requirement for catalysis by the hairpin ribozyme

1 reference

12 December 2020

Four ribose 2'-hydroxyl groups essential for catalytic function of the hairpin ribozyme

1 reference

12 December 2020

10.1017/S1355838299981670

Identifiers

DOI

1 reference

16 November 2017

1 reference

16 November 2017

PubMed publication ID

10024170

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