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English
Folding of the hairpin ribozyme in its natural conformation achieves close physical proximity of the loops
scientific article published on 01 May 1998
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
title
Folding of the hairpin ribozyme in its natural conformation achieves close physical proximity of the loops
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
author name string
A I Murchie
series ordinal
1
1 reference
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Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
J B Thomson
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
F Walter
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
D M Lilley
series ordinal
4
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
publication date
1 May 1998
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
published in
Molecular Cell
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
volume
1
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
issue
6
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
page(s)
873-881
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
cites work
Mutagenesis of the hairpin ribozyme
1 reference
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Crossref
reference URL
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7 January 2021
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Ionic interactions and the global conformations of the hammerhead ribozyme
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
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Ion-induced folding of the hammerhead ribozyme: a fluorescence resonance energy transfer study
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7 January 2021
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Deoxynucleoside phosphoramidites—A new class of key intermediates for deoxypolynucleotide synthesis
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7 January 2021
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RNA bulges and the helical periodicity of double-stranded RNA
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7 January 2021
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Structure-mapping of the hairpin ribozyme. Magnesium-dependent folding and evidence for tertiary interactions within the ribozyme-substrate complex
1 reference
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7 January 2021
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Reconstitution of hairpin ribozyme activity following separation of functional domains
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Non-enzymatic cleavage and ligation of RNAs complementary to a plant virus satellite RNA
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Solution structure of loop A from the hairpin ribozyme from tobacco ringspot virus satellite
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7 January 2021
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Novel guanosine requirement for catalysis by the hairpin ribozyme
1 reference
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7 January 2021
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Fluorescence resonance energy transfer and nucleic acids
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7 January 2021
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Fluorescence resonance energy transfer analysis of the structure of the four-way DNA junction
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7 January 2021
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Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy transfer
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7 January 2021
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Catalytic properties of hairpin ribozymes derived from Chicory yellow mottle virus and arabis mosaic virus satellite RNAs
1 reference
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7 January 2021
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The structure of the Holliday junction, and its resolution
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7 January 2021
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The global folding of four-way helical junctions in RNA, including that in U1 snRNA
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7 January 2021
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Inter-domain cross-linking and molecular modelling of the hairpin ribozyme
1 reference
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7 January 2021
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Two sequences participating in the autolytic processing of satellite tobacco ringspot virus complementary RNA
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7 January 2021
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Zwischenmolekulare Energiewanderung und Fluoreszenz
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7 January 2021
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Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy transfer
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7 January 2021
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Purine functional groups in essential residues of the hairpin ribozyme required for catalytic cleavage of RNA
1 reference
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7 January 2021
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A unique mechanism for RNA catalysis: the role of metal cofactors in hairpin ribozyme cleavage
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7 January 2021
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RNA catalytic properties of the minimum (-)sTRSV sequence
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7 January 2021
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'Hairpin' catalytic RNA model: evidence for helices and sequence requirement for substrate RNA.
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7 January 2021
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Kinetics and thermodynamics of intermolecular catalysis by hairpin ribozymes
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7 January 2021
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Enhanced folding of hairpin ribozymes with replaced domains
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7 January 2021
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A new type of hairpin ribozyme consisting of three domains
1 reference
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Crossref
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7 January 2021
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Construction of hairpin ribozymes with a three-way junction
1 reference
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Crossref
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7 January 2021
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Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
1 reference
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https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules
1 reference
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Crossref
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7 January 2021
based on heuristic
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An unusual pH-independent and metal-ion-independent mechanism for hairpin ribozyme catalysis
1 reference
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Crossref
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7 January 2021
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Mixed deoxyribo- and ribo-oligonucleotides with catalytic activity
1 reference
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Crossref
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7 January 2021
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Three-dimensional structure of a hammerhead ribozyme
1 reference
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Crossref
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7 January 2021
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Base and sugar requirements for RNA cleavage of essential nucleoside residues in internal loop B of the hairpin ribozyme: implications for secondary structure
1 reference
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7 January 2021
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The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
The loop B domain is physically separable from the loop A domain in the hairpin ribozyme
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Analysis of hairpin ribozyme base mutations in loops 2 and 4 and their effects on cis-cleavage in vitro
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Global structure of three-way DNA junctions with and without additional unpaired bases: a fluorescence resonance energy transfer analysis
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
In vitro selection of hammerhead ribozymes containing a bulged nucleotide in stem II.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Two autolytic processing reactions of a satellite RNA proceed with inversion of configuration
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Structures of bulged three-way DNA junctions
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
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7 January 2021
based on heuristic
inferred from DOI database lookup
Metal ions play a passive role in the hairpin ribozyme catalysed reaction
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS1097-2765%2800%2980086-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S1097-2765(00)80086-6
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
PubMed ID
9660970
1 reference
stated in
Europe PubMed Central
PubMed ID
9660970
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9660970%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
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