(Q35000323)

5 August 2017

title

Long insert whole genome sequencing for copy number variant and translocation detection (English)

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5 August 2017

main subject

whole genome sequencing

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Winnie S Liang

1

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5 August 2017

Jessica Aldrich

2

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5 August 2017

Waibhav Tembe

3

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5 August 2017

Ahmet Kurdoglu

4

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5 August 2017

Irene Cherni

5

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5 August 2017

Lori Phillips

6

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5 August 2017

Rebecca Reiman

7

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5 August 2017

Angela Baker

8

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5 August 2017

Glen J Weiss

9

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5 August 2017

John D Carpten

10

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5 August 2017

David W Craig

11

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5 August 2017

language of work or name

English

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publication date

25 September 2013

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5 August 2017

published in

Nucleic Acids Research

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5 August 2017

volume

42

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5 August 2017

issue

2

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5 August 2017

page(s)

e8

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Creative Commons Attribution 3.0 Unported

5 August 2017

copyright license

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Copy Number Variation detection from 1000 Genomes Project exon capture sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Long span DNA paired-end-tag (DNA-PET) sequencing strategy for the interrogation of genomic structural mutations and fusion-point-guided reconstruction of amplicons.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

DELLY: structural variant discovery by integrated paired-end and split-read analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Cancer genomics: technology, discovery, and translation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Personalized oncology through integrative high-throughput sequencing: a pilot study

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

CREST maps somatic structural variation in cancer genomes with base-pair resolution.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Advances in understanding cancer genomes through second-generation sequencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

The Sequence Alignment/Map format and SAMtools

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Fast and accurate short read alignment with Burrows-Wheeler transform

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

The Catalogue of Somatic Mutations in Cancer (COSMIC)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

Genomic mapping by fingerprinting random clones: a mathematical analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3902897

8 July 2018

Identifiers

DOI

10.1093/NAR/GKT865

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5 August 2017

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5 August 2017

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