(Q35012927)

5 August 2017

title

Comparative evaluation of linear and exponential amplification techniques for expression profiling at the single-cell level (English)

1 reference

5 August 2017

author name string

Tatiana Subkhankulova

series ordinal

1

1 reference

5 August 2017

Frederick J Livesey

series ordinal

2

1 reference

5 August 2017

publication date

7 March 2006

1 reference

5 August 2017

1 reference

5 August 2017

volume

7

1 reference

5 August 2017

issue

3

1 reference

5 August 2017

page(s)

R18

1 reference

describes a project that uses

5 August 2017

limma

object named as

Limma

2 references

22 June 2022

https://europepmc.org/article/PMC/1557751

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Evaluation of sense-strand mRNA amplification by comparative quantitative PCR

8 July 2018

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8 July 2018

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Validation of cDNA microarray gene expression data obtained from linearly amplified RNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Amplified RNA degradation in T7-amplification methods results in biased microarray hybridizations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Global amplification of mRNA by template-switching PCR: linearity and application to microarray analysis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Development and validation of a T7 based linear amplification for genomic DNA

8 July 2018

1 reference

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Single-Cell Microarray Analysis in Hippocampus CA1: Demonstration and Validation of Cellular Heterogeneity

8 July 2018

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Effects of mRNA amplification on gene expression ratios in cDNA experiments estimated by analysis of variance

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Fluorescent labelling of cRNA for microarray applications

8 July 2018

1 reference

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Optimization and evaluation of T7 based RNA linear amplification protocols for cDNA microarray analysis

8 July 2018

1 reference

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Within the fold: assessing differential expression measures and reproducibility in microarray assays.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Analysis of repeatability in spotted cDNA microarrays

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

RNA amplification results in reproducible microarray data with slight ratio bias

8 July 2018

1 reference

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Reverse transcriptase template switching: a SMART approach for full-length cDNA library construction

8 July 2018

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Reproducibility of alternative probe synthesis approaches for gene expression profiling with arrays

8 July 2018

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Microarray analysis of the transcriptional network controlled by the photoreceptor homeobox gene Crx.

8 July 2018

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Measuring agreement in method comparison studies

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Amplification of cDNA ends based on template-switching effect and step-out PCR.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Expression profiling of single cells using 3 prime end amplification (TPEA) PCR

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Construction of cDNA libraries from single cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Serial analysis of gene expression

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Analysis of gene expression in single live neurons

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Validation and application of a high fidelity mRNA linear amplification procedure for profiling gene expression.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Comparison of fluorescent tag DNA labeling methods used for expression analysis by DNA microarrays

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

High-fidelity mRNA amplification for gene profiling.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Analysis of gene expression in a complex differentiation hierarchy by global amplification of cDNA from single cells.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557751

Amplification protocols introduce systematic but reproducible errors into gene expression studies

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16542485

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2006-7-3-R18

1 reference

Dimensions Publication ID

5 August 2017

0 references

1 reference

5 August 2017

1 reference