(Q35018873)

5 August 2017

title

An integrative study of a meromictic lake ecosystem in Antarctica (English)

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5 August 2017

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1

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5 August 2017

Sheree Yau

3

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Charmaine Ng

Charmaine Ng

5

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Matthew Z DeMaere

Matthew Z DeMaere

2

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Ricardo Cavicchioli

Ricardo Cavicchioli

13

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Torsten Thomas

12

Torsten Thomas

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5 August 2017

Mark V Brown

4

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5 August 2017

David Wilkins

6

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5 August 2017

Mark J Raftery

7

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5 August 2017

John A E Gibson

8

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5 August 2017

Cynthia Andrews-Pfannkoch

9

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5 August 2017

Matthew Lewis

10

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5 August 2017

Jeffrey M Hoffman

11

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5 August 2017

publication date

2 December 2010

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5 August 2017

number of pages

17

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inferred from page(s)

published in

The ISME Journal

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5 August 2017

volume

5

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5 August 2017

issue

5

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5 August 2017

page(s)

879-895

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maintained by WikiProject

5 August 2017

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Viral and microbial community dynamics in four aquatic environments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Identifying biologically relevant differences between metagenomic communities

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

CRISPR/Cas, the immune system of bacteria and archaea

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

High diversity of the viral community from an Antarctic lake

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Explaining microbial population genomics through phage predation.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The genomic basis of trophic strategy in marine bacteria

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Dominance of a clonal green sulfur bacterial population in a stratified lake.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

A single-cell view on the ecophysiology of anaerobic phototrophic bacteria

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Carbon monoxide-dependent energy metabolism in anaerobic bacteria and archaea

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The microbial engines that drive Earth's biogeochemical cycles.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Accuracy and quality of massively parallel DNA pyrosequencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

COPASI--a COmplex PAthway SImulator

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

MetaGene: prokaryotic gene finding from environmental genome shotgun sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

KOBAS server: a web-based platform for automated annotation and pathway identification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

WindowMasker: window-based masker for sequenced genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Community structure and metabolism through reconstruction of microbial genomes from the environment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The COG database: an updated version includes eukaryotes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Isolation of novel ultramicrobacteria classified as actinobacteria from five freshwater habitats in Europe and Asia

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

TIGRFAMs: a protein family resource for the functional identification of proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The COG database: new developments in phylogenetic classification of proteins from complete genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Microdiversity of uncultured marine prokaryotes: the SAR11 cluster and the marine Archaea of Group I.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The diversity-stability debate

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

A whole-genome assembly of Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

The microbial composition of three limnologically disparate hypersaline Antarctic lakes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

A genomic perspective on protein families

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105772

Average genome size: a potential source of bias in comparative metagenomics

8 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

DNA sequence quality trimming and vector removal

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Systematic artifacts in metagenomes from complex microbial communities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Co-occurrence of denitrification and nitrogen fixation in a meromictic lake, Lake Cadagno (Switzerland).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Aggressive assembly of pyrosequencing reads with mates

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Metaproteogenomic analysis of a dominant green sulfur bacterium from Ace Lake, Antarctica.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Bacterial mortality and the fate of bacterial production

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Community proteomics of a natural microbial biofilm

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Stoichiometric control of organic carbon-nitrate relationships from soils to the sea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Adaptation and the evolution of parasite virulence in a connected world.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Ecology of a novel Synechococcus clade occurring in dense populations in saline Antarctic lakes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Evolution of the methane cycle in Ace Lake (Antarctica) during the Holocene: response of methanogens and methanotrophs to environmental change

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

Actinorhodopsins: proteorhodopsin-like gene sequences found predominantly in non-marine environments

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21124488

12 December 2020

inferred from PubMed ID database lookup

SULFUR AND METHANE CYCLING DURING THE HOLOCENE IN ACE LAKE (ANTARCTICA) REVEALED BY LIPID AND DNA STRATIGRAPHY

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

7 January 2021

inferred from DOI database lookup

The meromictic lakes and stratified marine basins of the Vestfold Hills, East Antarctica

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.185

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/ISMEJ.2010.185

1 reference

5 August 2017

1 reference

5 August 2017

1 reference