(Q35023938)

5 August 2017

title

Bringing the gut microbiota into focus through microbial culture: recent progress and future perspective (English)

1 reference

5 August 2017

1

Emma Allen-Vercoe

1 reference

5 August 2017

publication date

19 October 2013

1 reference

Current Opinion in Microbiology

5 August 2017

published in

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5 August 2017

volume

16

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5 August 2017

issue

5

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5 August 2017

page(s)

625-629

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Evaluation of microbial community reproducibility, stability and composition in a human distal gut chemostat model.

5 August 2017

cites work

1 reference

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8 July 2018

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Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum

8 July 2018

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As-yet-uncultivated oral bacteria: breadth and association with oral and extra-oral diseases

8 July 2018

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Some are more equal than others: the role of "keystone" species in the degradation of recalcitrant substrates

8 July 2018

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The gut microbiota--masters of host development and physiology

8 July 2018

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A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets

8 July 2018

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Microbial ecosystems therapeutics: a new paradigm in medicine?

8 July 2018

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Biodiversity and functional genomics in the human microbiome

8 July 2018

1 reference

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Microbial cultivation and the role of microbial resource centers in the omics era.

8 July 2018

1 reference

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Microbial culturomics: paradigm shift in the human gut microbiome study

8 July 2018

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A framework for human microbiome research

8 July 2018

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Structure, function and diversity of the healthy human microbiome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon.

8 July 2018

1 reference

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MALDI-TOF MS in microbiological diagnostics-identification of microorganisms and beyond (mini review).

8 July 2018

1 reference

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Incorporating a mucosal environment in a dynamic gut model results in a more representative colonization by lactobacilli

8 July 2018

1 reference

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Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Advances and perspectives in in vitro human gut fermentation modeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Enterotypes of the human gut microbiome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Directed culturing of microorganisms using metatranscriptomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Quantitative assessment of the human gut microbiome using multitag pyrosequencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

A catalog of reference genomes from the human microbiome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

A human gut microbial gene catalogue established by metagenomic sequencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Growth rate effects on fundamental transport properties of bacterial populations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

A microbial world within us

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Diversity of the human intestinal microbial flora

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Use of a three-stage continuous culture system to study the effect of mucin on dissimilatory sulfate reduction and methanogenesis by mixed populations of human gut bacteria.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

PCR-DGGE-based quantification of stability of the microbial community in a simulator of the human intestinal microbial ecosystem

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Genome-based design of a cell-free culture medium for Tropheryma whipplei.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

A Closer Look at Bacteroides: Phylogenetic Relationship and Genomic Implications of a Life in the Human Gut

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859468

Influence of mucin on glycosidase, protease and arylamidase activities of human gut bacteria grown in a 3-stage continuous culture system

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24148301

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Effect of diet on human fecal flora: comparison of Japanese and American diets

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24148301

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MIB.2013.09.008

1 reference

5 August 2017

1 reference

5 August 2017

1 reference