(Q35037205)

5 August 2017

title

Complete genome sequence of Deinococcus maricopensis type strain (LB-34). (English)

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5 August 2017

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Deinococcus maricopensis

Deinococcus maricopensis

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based on heuristic

inferred from title

whole genome sequencing

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13

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21

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27

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31

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34

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4

Alla Lapidus

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Evelyne-Marie Brambilla

25

Evelyne-Marie Brambilla

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Hans-Peter Klenk

35

Hans-Peter Klenk

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Philip Hugenholtz

33

Philip Hugenholtz

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Tanja Woyke

29

Tanja Woyke

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Cliff Han

Cliff Han

17

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Sam Pitluck

9

Sam Pitluck

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32

Victor Markowitz

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15

Amrita Pati

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8

Jan-Fang Cheng

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28

J Chris Detter

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Konstantinos Mavromatis

14

Konstantinos Mavromatis

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18

Lynne Goodwin

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1

Rüdiger Pukall

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12

Natalia Mikhailova

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22

Loren Hauser

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20

Krishna Palaniappan

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7

Matt Nolan

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19

Amy Chen

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3

Susan Lucas

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24

Cynthia D Jeffries

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26

Manfred Rohde

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5

Nancy Hammon

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11

Ioanna Pagani

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23

Yun-Juan Chang

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6

Shweta Deshpande

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2

Ahmet Zeytun

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16

Roxane Tapia

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10

Konstantinos Liolios

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30

James Bristow

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publication date

25 April 2011

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Standards in genomic sciences

5 August 2017

published in

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5 August 2017

volume

4

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5 August 2017

issue

2

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5 August 2017

page(s)

163-172

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https://scigraph.springernature.com/pub.10.4056/sigs.1633949

5 August 2017

exact match

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cites work

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Complete genome sequence of Oceanithermus profundus type strain (506)

8 July 2018

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Complete genome sequence of Truepera radiovictrix type strain (RQ-24)

8 July 2018

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Complete genome sequence of Meiothermus ruber type strain (21)

8 July 2018

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8 July 2018

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Prodigal: prokaryotic gene recognition and translation initiation site identification

8 July 2018

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8 July 2018

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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

8 July 2018

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Deinococcus wulumuqiensis sp. nov., and Deinococcus xibeiensis sp. nov., isolated from radiation-polluted soil

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus aerolatus sp. nov. and Deinococcus aerophilus sp. nov., isolated from air samples

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus piscis sp. nov., a radiation-resistant bacterium isolated from a marine fish

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus aerius sp. nov., isolated from the high atmosphere.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

IMG ER: a system for microbial genome annotation expert review and curation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus gobiensis sp. nov., an extremely radiation-resistant bacterium

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus xinjiangensis sp. nov., isolated from desert soil

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus aquiradiocola sp. nov., isolated from a radioactive site in Japan

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus aquatilis sp. nov., isolated from water

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

A rapid bootstrap algorithm for the RAxML Web servers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus aquaticus sp. nov., isolated from fresh water, and Deinococcus caeni sp. nov., isolated from activated sludge

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

The minimum information about a genome sequence (MIGS) specification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Description of four novel psychrophilic, ionizing radiation-sensitive Deinococcus species from alpine environments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus misasensis and Deinococcus roseus, novel members of the genus Deinococcus, isolated from a radioactive site in Japan.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus geothermalis: the pool of extreme radiation resistance genes shrinks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus cellulosilyticus sp. nov., isolated from air.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus peraridilitoris sp. nov., isolated from a coastal desert

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus ficus sp. nov., isolated from the rhizosphere of Ficus religiosa L.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus deserti sp. nov., a gamma-radiation-tolerant bacterium isolated from the Sahara Desert.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a single soil sample

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus frigens sp. nov., Deinococcus saxicola sp. nov., and Deinococcus marmoris sp. nov., low temperature and draught-tolerating, UV-resistant bacteria from continental Antarctica

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus indicus sp. nov., an arsenic-resistant bacterium from an aquifer in West Bengal, India

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Multiple sequence alignment using partial order graphs

8 July 2018

1 reference

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The Deinococcus-Thermus phylum and the effect of rRNA composition on phylogenetic tree construction.

8 July 2018

1 reference

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Gene ontology: tool for the unification of biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Genome Sequence of the Radioresistant Bacterium Deinococcus radiodurans R1

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Deinococcus geothermalis sp. nov. and Deinococcus murrayi sp. nov., two extremely radiation-resistant and slightly thermophilic species from hot springs.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Nomenclature for "Micrococcus radiodurans" and Other Radiation-Resistant Cocci: Deinococcaceae fam. nov. and Deinococcus gen. nov., Including Five Species

8 July 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.1633949

A Radiation-Resistant Rod-Shaped Bacterium, Deinobacter grandis gen. nov., sp. nov., with Peptidoglycan Containing Ornithine

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.1633949

Phylogenetic Diversity of the Deinococci as Determined by 16S Ribosomal DNA Sequence Comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.1633949

Complete genome sequence of Bacteroides helcogenes type strain (P 36-108).

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.1633949

Validation List no. 85: Validation of publication of new names and new combinations previously effectively published outside the IJSEM. International Journal of Systematic and Evolutionary Microbiology

21 January 2018

2 references

https://api.crossref.org/works/10.4056%2FSIGS.1633949

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

Validation List no. 106: Validation of publication of new names and new combinations previously effectively published outside the IJSEM

25 October 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.1633949

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.1633949

How many bootstrap replicates are necessary?

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111983

25 October 2018

Identifiers

DOI

10.4056/SIGS.1633949

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Dimensions Publication ID

5 August 2017

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5 August 2017

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