(Q35061962)

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Accurate detection of subclonal single nucleotide variants in whole genome amplified and pooled cancer samples using HaloPlex target enrichment

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scholarly article

1 reference

Europe PubMed Central

6 August 2017

Accurate detection of subclonal single nucleotide variants in whole genome amplified and pooled cancer samples using HaloPlex target enrichment (English)

1 reference

Europe PubMed Central

6 August 2017

whole genome sequencing

1 reference

based on heuristic

inferred from title

Ann-Christine Syvänen

10

object named as

Ann-Christine Syvänen

0 references

Carl Mårten Lindqvist

object named as

Carl Mårten Lindqvist

2

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author name string

Eva C Berglund

1

1 reference

Europe PubMed Central

6 August 2017

Shahina Hayat

3

1 reference

Europe PubMed Central

6 August 2017

Elin Övernäs

4

1 reference

Europe PubMed Central

6 August 2017

Niklas Henriksson

5

1 reference

Europe PubMed Central

6 August 2017

Jessica Nordlund

6

1 reference

Europe PubMed Central

6 August 2017

Per Wahlberg

7

1 reference

Europe PubMed Central

6 August 2017

Erik Forestier

8

1 reference

Europe PubMed Central

6 August 2017

Gudmar Lönnerholm

9

1 reference

Europe PubMed Central

6 August 2017

language of work or name

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publication date

5 December 2013

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Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

14

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Europe PubMed Central

6 August 2017

856

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Europe PubMed Central

6 August 2017

https://scigraph.springernature.com/pub.10.1186/1471-2164-14-856

0 references

A comparative analysis of algorithms for somatic SNV detection in cancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia

1 reference

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8 July 2018

Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Population-based rare variant detection via pooled exome or custom hybridization capture with or without individual indexing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

An integrated map of genetic variation from 1,092 human genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Rare variant discovery and calling by sequencing pooled samples with overlaps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Accurate variant detection across non-amplified and whole genome amplified DNA using targeted next generation sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Exome sequencing and complex disease: practical aspects of rare variant association studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

The origin and evolution of mutations in acute myeloid leukemia

1 reference

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8 July 2018

The Pediatric Cancer Genome Project

1 reference

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8 July 2018

Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

SomaticSniper: identification of somatic point mutations in whole genome sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Targeted enrichment of genomic DNA regions for next-generation sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

An evaluation of different target enrichment methods in pooled sequencing designs for complex disease association studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Unlocking Mendelian disease using exome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Structural alterations from multiple displacement amplification of a human genome revealed by mate-pair sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Efficient and cost effective population resequencing by pooling and in-solution hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

A framework for variation discovery and genotyping using next-generation DNA sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Targeted deep resequencing of the human cancer genome using next-generation technologies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Genomic DNA pooling strategy for next-generation sequencing-based rare variant discovery in abdominal aortic aneurysm regions of interest-challenges and limitations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Targeted resequencing of candidate genes using selector probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Mutation discovery by targeted genomic enrichment of multiplexed barcoded samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

International network of cancer genome projects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Personal genome sequencing: current approaches and challenges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Long-term results of NOPHO ALL-92 and ALL-2000 studies of childhood acute lymphoblastic leukemia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4046713

8 July 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

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Multigene amplification and massively parallel sequencing for cancer mutation discovery

1 reference

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Primer3Plus, an enhanced web interface to Primer3

1 reference

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8 July 2018

Multiple displacement amplification to create a long-lasting source of DNA for genetic studies

1 reference

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8 July 2018

Multiplex amplification enabled by selective circularization of large sets of genomic DNA fragments

1 reference

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8 July 2018

Quantitative evaluation by minisequencing and microarrays reveals accurate multiplexed SNP genotyping of whole genome amplified DNA.

1 reference

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8 July 2018

Initial sequencing and analysis of the human genome

1 reference

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8 July 2018

The Sequence of the Human Genome

1 reference

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8 July 2018

Identifiers

10.1186/1471-2164-14-856

1 reference

Europe PubMed Central

6 August 2017

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PMC publication ID

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

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