(Q35064497)

6 August 2017

title

Whole transcriptome characterization of the effects of dehydration and rehydration on Cladonia rangiferina, the grey reindeer lichen (English)

1 reference

6 August 2017

0 references

Cladonia rangiferina

1 reference

Sini Junttila

1

1 reference

6 August 2017

Asta Laiho

series ordinal

2

1 reference

6 August 2017

Attila Gyenesei

series ordinal

3

1 reference

6 August 2017

Stephen Rudd

series ordinal

4

1 reference

6 August 2017

language of work or name

English

0 references

publication date

10 December 2013

1 reference

6 August 2017

1 reference

6 August 2017

volume

14

1 reference

6 August 2017

page(s)

870

1 reference

describes a project that uses

6 August 2017

limma

object named as

Limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3878897

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Characterization of a transcriptome from a non-model organism, Cladonia rangiferina, the grey reindeer lichen, using high-throughput next generation sequencing and EST sequence data

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont

8 July 2018

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Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid

8 July 2018

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Structure and function of the symbiosis partners of the lung lichen (Lobaria pulmonaria L. Hoffm.) analyzed by metaproteomics.

8 July 2018

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Function of S-nitrosoglutathione reductase (GSNOR) in plant development and under biotic/abiotic stress

8 July 2018

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8 July 2018

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Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice

8 July 2018

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Bacterial communities associated with the lichen symbiosis

8 July 2018

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Cytochrome P450 metabolizing fatty acids in plants: characterization and physiological roles.

8 July 2018

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Fungal and algal gene expression in early developmental stages of lichen-symbiosis

8 July 2018

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Unusual P450 reactions in plant secondary metabolism.

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Cytochrome P450 enzymes in the fungal kingdom

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Analysis of gene expression and physiological responses in three Mexican maize landraces under drought stress and recovery irrigation

8 July 2018

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A combined subtractive suppression hybridization and expression profiling strategy to identify novel desiccation response transcripts from Tortula ruralis gametophytes

8 July 2018

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Role of plant RNA-binding proteins in development, stress response and genome organization.

8 July 2018

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Role of the histone variant H2A.Z/Htz1p in TBP recruitment, chromatin dynamics, and regulated expression of oleate-responsive genes

8 July 2018

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Desiccation survival in an Antarctic nematode: molecular analysis using expressed sequenced tags

8 July 2018

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Expression profiling of rice cultivars differing in their tolerance to long-term drought stress

8 July 2018

1 reference

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8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Metabolic processes sustaining the reviviscence of lichen Xanthoria elegans (Link) in high mountain environments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

A putative Arabidopsis nucleoporin, AtNUP160, is critical for RNA export and required for plant tolerance to cold stress.

8 July 2018

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

8 July 2018

1 reference

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Response of the leaf cell wall to desiccation in the resurrection plant Myrothamnus flabellifolius

8 July 2018

1 reference

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The RIN: an RNA integrity number for assigning integrity values to RNA measurements

8 July 2018

1 reference

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A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Characterization of enzymatic antioxidants in the lichen Ramalina lacera and their response to rehydration

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

8 July 2018

1 reference

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Rehydration of the lichen Ramalina lacera results in production of reactive oxygen species and nitric oxide and a decrease in antioxidants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Antioxidants and photoprotection in a lichen as compared with its isolated symbiotic partners.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Support vector machines for separation of mixed plant-pathogen EST collections based on codon usage.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

The rehydration transcriptome of the desiccation-tolerant bryophyte Tortula ruralis: transcript classification and analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Bioconductor: open software development for computational biology and bioinformatics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

InterProScan--an integration platform for the signature-recognition methods in InterPro

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Gene ontology: tool for the unification of biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Nup192p is a conserved nucleoporin with a preferential location at the inner site of the nuclear membrane

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Basic local alignment search tool

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Activation of mechanisms of photoprotection by desiccation and by light: poikilohydric photoautotrophs.

8 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-870

Gene expression indicates a zone of heterocyst differentiation within the thallus of the cyanolichen Pseudocyphellaria crocata

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-870

Photosynthetic genes are differentially transcribed during the dehydration-rehydration cycle in the resurrection plant, Xerophyta humilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-870

STABILIZED1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover, and stress tolerance in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-870

SCANPS: a web server for iterative protein sequence database searching by dynamic programing, with display in a hierarchical SCOP browser

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-870

The response of Asterochloris erici (Ahmadjian) Skaloud et Peksa to desiccation: a proteomic approach.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Hydrophobins DGH1, DGH2, and DGH3 in the lichen-forming basidiomycete Dictyonema glabratum

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3878897

Mutations affecting induction of glycolytic and fermentative genes during germination and environmental stresses in Arabidopsis

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24325588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Functional characterization of water-deficit stress responsive genes using RNAi

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24325588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-14-870

1 reference

6 August 2017

1 reference

6 August 2017

1 reference