(Q35070206)

6 August 2017

title

Comparison of ultra-conserved elements in drosophilids and vertebrates (English)

1 reference

6 August 2017

Igor V Makunin

1

1 reference

6 August 2017

Viktor V Shloma

2

1 reference

6 August 2017

Stuart J Stephen

3

1 reference

6 August 2017

Michael Pheasant

4

1 reference

6 August 2017

Stepan N Belyakin

5

1 reference

6 August 2017

language of work or name

English

0 references

publication date

13 December 2013

1 reference

6 August 2017

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6 August 2017

volume

8

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6 August 2017

issue

12

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6 August 2017

page(s)

e82362

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Creative Commons Attribution 4.0 International

6 August 2017

copyright license

start time

13 December 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Deletion of ultraconserved elements yields viable mice

8 July 2018

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Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas

8 July 2018

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8 July 2018

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Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

8 July 2018

1 reference

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8 July 2018

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8 July 2018

1 reference

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Mammalian ultraconserved elements are strongly depleted among segmental duplications and copy number variants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator

8 July 2018

1 reference

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

8 July 2018

1 reference

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A distal enhancer and an ultraconserved exon are derived from a novel retroposon

8 July 2018

1 reference

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Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Ultraconserved elements in insect genomes: a highly conserved intronic sequence implicated in the control of homothorax mRNA splicing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

In vivo characterization of a vertebrate ultraconserved enhancer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Highly conserved non-coding sequences are associated with vertebrate development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Role of a neuronal small non-messenger RNA: behavioural alterations in BC1 RNA-deleted mice.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Ultraconserved Elements in the Human Genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

The Gene Ontology (GO) database and informatics resource

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

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8 July 2018

1 reference

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"Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3862641

Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Conserved distances between vertebrate highly conserved elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Transposon-free regions in mammalian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Megabase deletions of gene deserts result in viable mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

SNPs in ultraconserved elements and familial breast cancer risk.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Large number of ultraconserved elements were already present in the jawed vertebrate ancestor

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Conservation patterns in different functional sequence categories of divergent Drosophila species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Evidence for control of splicing by alternative RNA secondary structures in Dipteran homothorax pre-mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Gene density profile reveals the marking of late replicated domains in the Drosophila melanogaster genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Intercalary heterochromatin in Drosophila melanogaster polytene chromosomes and the problem of genetic silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Exaptation—a Missing Term in the Science of Form

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

Large-Scale Appearance of Ultraconserved Elements in Tetrapod Genomes and Slowdown of the Molecular Clock

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082362

SNPs in ultraconserved elements and familial breast cancer risk

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24349264

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0082362

1 reference

6 August 2017

0 references

1 reference

6 August 2017

1 reference