(Q35071402)

6 August 2017

title

Molecular dynamics simulation of protein denaturation: solvation of the hydrophobic cores and secondary structure of barnase (English)

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6 August 2017

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2

Karplus M

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6 August 2017

Caflisch A

1

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6 August 2017

language of work or name

English

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publication date

1 March 1994

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6 August 2017

number of pages

5

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Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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6 August 2017

volume

91

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6 August 2017

issue

5

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6 August 2017

page(s)

1746-1750

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Water structure of a hydrophobic protein at atomic resolution: Pentagon rings of water molecules in crystals of crambin

6 August 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

The sixth Datta Lecture. Protein folding and stability: the pathway of folding of barnase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

NMR and protein folding: equilibrium and stopped-flow studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Molecular structure of a new family of ribonucleases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Transient conformational states in proteins followed by differential labeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Energetics of complementary side-chain packing in a protein hydrophobic core

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Transient folding intermediates characterized by protein engineering

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Thermodynamics and mechanism of alpha helix initiation in alanine and valine peptides.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Molecular dynamics simulations of the unfolding of an alpha-helical analogue of ribonuclease A S-peptide in water

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Determination of the three-dimensional solution structure of barnase using nuclear magnetic resonance spectroscopy

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

The folding of an enzyme. IV. Structure of an intermediate in the refolding of barnase analysed by a protein engineering procedure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

The folding of an enzyme. III. Structure of the transition state for unfolding of barnase analysed by a protein engineering procedure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

An N-terminal fragment of barnase has residual helical structure similar to that in a refolding intermediate

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Characterization of "native" apomyoglobin by molecular dynamics simulation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

Laser photo-CIDNP as a surface probe for proteins in solution.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=43240

The folding of an enzyme. V. H/2H exchange-nuclear magnetic resonance studies on the folding pathway of barnase: complementarity to and agreement with protein engineering studies

8 July 2018

1 reference

12 December 2020

Water-inserted alpha-helical segments implicate reverse turns as folding intermediates

1 reference

12 December 2020

Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

1 reference

12 December 2020

Molecular dynamics simulations of the unfolding of apomyoglobin in water

1 reference

12 December 2020

Simulation of the thermal denaturation of hen egg white lysozyme: trapping the molten globule state

1 reference

12 December 2020

The folding of an enzyme. VI. The folding pathway of barnase: comparison with theoretical models

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.91.5.1746

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6 August 2017

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6 August 2017

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