(Q35080678)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

title

Genes with internal repeats require the THO complex for transcription (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0000347

nucleoplasmic THO complex

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0000446

THO complex part of transcription export complex

1 reference

Gene Ontology release 2020-05-02

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

An Jansen

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

author name string

Vladimir Voynov

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

Vanessa M Runner

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

Stephen Buratowski

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

Gerald R Fink

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

language of work or name

English

0 references

publication date

18 September 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

30 December 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

volume

103

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

issue

39

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

page(s)

14423-14428

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

30 December 2019

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1599979/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Growth inhibition mediated by excess negative supercoiling: the interplay between transcription elongation, R-loop formation and DNA topology

1 reference

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Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability

8 July 2018

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Tandem repeat copy-number variation in protein-coding regions of human genes

8 July 2018

1 reference

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Intragenic tandem repeats generate functional variability

8 July 2018

1 reference

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TREX, SR proteins and export of mRNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Transitions in RNA polymerase II elongation complexes at the 3' ends of genes

8 July 2018

1 reference

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Running with RNA polymerase: eukaryotic transcript elongation

8 July 2018

1 reference

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Cotranscriptionally Formed DNA:RNA Hybrids Mediate Transcription Elongation Impairment and Transcription-Associated Recombination

8 July 2018

1 reference

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Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

TREX is a conserved complex coupling transcription with messenger RNA export

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

An extensive network of coupling among gene expression machines

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

High-copy-number expression of Sub2p, a member of the RNA helicase superfamily, suppresses hpr1-mediated genomic instability

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Reciprocal regulation of anaerobic and aerobic cell wall mannoprotein gene expression in Saccharomyces cerevisiae

8 July 2018

1 reference

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Transcription of eukaryotic protein-coding genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

A Saccharomyces gene family involved in invasive growth, cell-cell adhesion, and mating

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Recombination between DNA repeats in yeast hpr1delta cells is linked to transcription elongation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Saccharomyces cerevisiae S288C has a mutation in FLO8, a gene required for filamentous growth

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Mutations in the RNA polymerase II transcription machinery suppress the hyperrecombination mutant hpr1 delta of Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Muc1, a mucin-like protein that is regulated by Mss10, is critical for pseudohyphal differentiation in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Isolation of mutants of Saccharomyces cerevisiae requiring DNA topoisomerase I.

8 July 2018

1 reference

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Elements of a single MAP kinase cascade in Saccharomyces cerevisiae mediate two developmental programs in the same cell type: mating and invasive growth

8 July 2018

1 reference

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Mitotic recombination in the rDNA of S. cerevisiae is suppressed by the combined action of DNA topoisomerases I and II.

8 July 2018

1 reference

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Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Supercoiling of the DNA template during transcription

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

HPR1, a novel yeast gene that prevents intrachromosomal excision recombination, shows carboxy-terminal homology to the Saccharomyces cerevisiae TOP1 gene.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster

8 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0606546103

Using chromatin immunoprecipitation to map cotranscriptional mRNA processing in Saccharomyces cerevisiae.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1599979

Modulation of Transcription Affects mRNP Quality

27 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0606546103

A subthreshold level of DNA topoisomerases leads to the excision of yeast rDNA as extrachromosomal rings

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16983072

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0606546103

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16983072%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

PubMed publication ID

16983072

1 reference