(Q35089085)

6 August 2017

title

A synthetic system links FeFe-hydrogenases to essential E. coli sulfur metabolism (English)

1 reference

6 August 2017

0 references

5

Pamela A Silver

1 reference

6 August 2017

Buz Barstow

1

1 reference

ORCID Public Data File 2021

author name string

Christina M Agapakis

2

1 reference

6 August 2017

Patrick M Boyle

3

1 reference

6 August 2017

Gerald Grandl

4

1 reference

6 August 2017

Edwin H Wintermute

6

1 reference

6 August 2017

publication date

26 May 2011

1 reference

Journal of biological engineering

6 August 2017

published in

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6 August 2017

volume

5

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6 August 2017

page(s)

7

1 reference

Development of an in vitro compartmentalization screen for high-throughput directed evolution of [FeFe] hydrogenases

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

A cell-free microtiter plate screen for improved [FeFe] hydrogenases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Heterologous expression and maturation of an NADP-dependent [NiFe]-hydrogenase: a key enzyme in biofuel production

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

The surprising diversity of clostridial hydrogenases: a comparative genomic perspective

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Insulation of a synthetic hydrogen metabolism circuit in bacteria

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

How oxygen attacks [FeFe] hydrogenases from photosynthetic organisms

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Pattern of expression and substrate specificity of chloroplast ferredoxins from Chlamydomonas reinhardtii

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Protein dynamics and conformational disorder in molecular recognition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Introduction of methionines in the gas channel makes [NiFe] hydrogenase aero-tolerant

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Construction of a synthetic YdbK-dependent pyruvate:H2 pathway in Escherichia coli BL21(DE3)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Directed enzyme evolution: climbing fitness peaks one amino acid at a time

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

The SWISS-MODEL Repository and associated resources

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Dithiomethylether as a ligand in the hydrogenase h-cluster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

KEGG for linking genomes to life and the environment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Characterization of two 2[4Fe4S] ferredoxins from Clostridium acetobutylicum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Occurrence, classification, and biological function of hydrogenases: an overview.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Atomic resolution modeling of the ferredoxin:[FeFe] hydrogenase complex from Chlamydomonas reinhardtii

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Application of gene-shuffling for the rapid generation of novel [FeFe]-hydrogenase libraries

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Hydrogenases and hydrogen photoproduction in oxygenic photosynthetic organisms.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Maturation of hydrogenases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

[NiFe]-hydrogenases of Ralstonia eutropha H16: modular enzymes for oxygen-tolerant biological hydrogen oxidation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Hydrogen evolution by a chloroplast-ferredoxin-hydrogenase system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Light-driven hydrogen production by a hybrid complex of a [NiFe]-hydrogenase and the cyanobacterial photosystem I

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Functional studies of [FeFe] hydrogenase maturation in an Escherichia coli biosynthetic system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Structure and function of plant-type ferredoxins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Oxygen tolerance of the H2-sensing [NiFe] hydrogenase from Ralstonia eutropha H16 is based on limited access of oxygen to the active site.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Identification of genes required for hydrogenase activity in Chlamydomonas reinhardtii

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Expression and regulation of a silent operon, hyf, coding for hydrogenase 4 isoenzyme in Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Ferredoxins as Electron Carriers in Photosynthesis and in the Biological Production and Consumption of Hydrogen Gas

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Fe-only hydrogenases: structure, function and evolution.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Characterization of the oxygen tolerance of a hydrogenase linked to a carbon monoxide oxidation pathway in Rubrivivax gelatinosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Hydrogenases: hydrogen-activating enzymes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Succinate dehydrogenase and fumarate reductase from Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Physical and genetic map of the Clostridium saccharobutylicum (formerly Clostridium acetobutylicum) NCP 262 chromosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

A new logic for DNA engineering using recombination in Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Isolation and analysis of the gene encoding the pyruvate-ferredoxin oxidoreductase of Desulfovibrio africanus, production of the recombinant enzyme in Escherichia coli, and effect of carboxy-terminal deletions on its stability

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Cellular and molecular physiology of Escherichia coli in the adaptation to aerobic environments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Algorithms for Evaluating the Long-range Accessibility of Protein Surfaces

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Solution structure of the oxidized 2[4Fe-4S] ferredoxin from Clostridium pasteurianum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Regulation by molecular oxygen and organic substrates of hydrogenase synthesis in Alcaligenes eutrophus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Examination of protein sequence homologies: V. New perspectives on evolution between bacterial and chloroplast-type ferredoxins inferred from sequence evidence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

The properties of hydrogenase from Thiocapsa roseopersicina

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Structure and Evolution of Chloroplast- and Bacterial-Type Ferredoxins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Visible light-driven H(2) production by hydrogenases attached to dye-sensitized TiO(2) nanoparticles

8 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Dynamic electrochemical experiments on hydrogenases

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

The difference a Se makes? Oxygen-tolerant hydrogen production by the [NiFeSe]-hydrogenase from Desulfomicrobium baculatum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Hydrogen-activating enzymes: activity does not correlate with oxygen sensitivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Complete activity profile of Clostridium acetobutylicum [FeFe]-hydrogenase and kinetic parameters for endogenous redox partners.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Characterization of the recombinant Rieske [2Fe-2S] proteins HcaC and YeaW from E. coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Escherichia coli hydrogenase 3 is a reversible enzyme possessing hydrogen uptake and synthesis activities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Hyperproduction of recombinant ferredoxins in escherichia coli by coexpression of the ORF1-ORF2-iscS-iscU-iscA-hscB-hs cA-fdx-ORF3 gene cluster.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Flavodoxin and NADPH-flavodoxin reductase from Escherichia coli support bovine cytochrome P450c17 hydroxylase activities.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3130634

Theoretical Study of Dioxygen Induced Inhibition of [FeFe]-Hydrogenase

27 September 2018

1 reference

https://api.crossref.org/works/10.1186%2F1754-1611-5-7

Raman spectroscopy of charge transfer interactions between single wall carbon nanotubes and [FeFe] hydrogenase

21 January 2018

1 reference

12 December 2020

Analysis of reductant supply systems for ferredoxin-dependent sulfite reductase in photosynthetic and nonphotosynthetic organs of maize

1 reference

12 December 2020

The bidirectional hydrogenase of Synechocystis sp. PCC 6803 works as an electron valve during photosynthesis

1 reference

12 December 2020

Oxygen profiles in, and in the agar beneath, colonies of Bacillus cereus, Staphylococcus albus and Escherichia coli

1 reference

12 December 2020

Interaction of positively charged amino acid residues of recombinant, cyanobacterial ferredoxin:NADP+ reductase with ferredoxin probed by site directed mutagenesis

1 reference

12 December 2020

Solar energy conversion in a photoelectrochemical biofuel cell

1 reference

12 December 2020

Computer simulation of interaction of photosystem 1 with plastocyanin and ferredoxin

1 reference

12 December 2020

Probing the role of electrostatic forces in the interaction of Clostridium pasteurianum ferredoxin with its redox partners

1 reference

12 December 2020

Penetration of oxygen into bacterial colonies

1 reference

12 December 2020

Identifiers

DOI

10.1186/1754-1611-5-7

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference