(Q35095833)

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Sequential unfolding of individual helices of bacterioopsin observed in molecular dynamics simulations of extraction from the purple membrane

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16861280%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Sequential unfolding of individual helices of bacterioopsin observed in molecular dynamics simulations of extraction from the purple membrane (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16861280%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

1

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27 December 2019

2

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27 December 2019

Amedeo Caflisch

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Amedeo Caflisch

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27 December 2019

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Emanuele Paci

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27 December 2019

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21 July 2006

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27 December 2019

Biophysical Journal

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27 December 2019

91

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27 December 2019

9

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27 December 2019

3276-3284

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16861280%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Bacteriorhodopsin folds into the membrane against an external force

1 reference

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9 July 2018

Solving the membrane protein folding problem

1 reference

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9 July 2018

Change of the unbinding mechanism upon a mutation: a molecular dynamics study of an antibody-hapten complex

1 reference

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9 July 2018

Molecular force modulation spectroscopy revealing the dynamic response of single bacteriorhodopsins.

1 reference

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9 July 2018

Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A.

1 reference

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9 July 2018

Disease-related misassembly of membrane proteins

1 reference

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9 July 2018

Unfolding pathways of native bacteriorhodopsin depend on temperature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Pulling geometry defines the mechanical resistance of a beta-sheet protein

1 reference

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9 July 2018

Forced detachment of the CD2-CD58 complex

1 reference

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9 July 2018

Stability of bacteriorhodopsin alpha-helices and loops analyzed by single-molecule force spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

The structure of bacterial outer membrane proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

The druggable genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Forces and energetics of hapten-antibody dissociation: a biased molecular dynamics simulation study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Structural basis of water-specific transport through the AQP1 water channel

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Molecular dynamics force probe simulations of antibody/antigen unbinding: entropic control and nonadditivity of unbinding forces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Steered molecular dynamics and mechanical functions of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Chemically distinct transition states govern rapid dissociation of single L-selectin bonds under force

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Stepwise unfolding of titin under force-clamp atomic force microscopy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Crystal structure of rhodopsin: A G protein-coupled receptor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Unfolding proteins by external forces and temperature: the importance of topology and energetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Unfolding pathways of individual bacteriorhodopsins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Mechanical unfolding intermediates in titin modules.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Structure of bacteriorhodopsin at 1.55 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Closing in on bacteriorhodopsin: progress in understanding the molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Effective energy function for proteins in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Forced unfolding of the fibronectin type III module reveals a tensile molecular recognition switch

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin-lipid complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Molecular dynamics study of unbinding of the avidin-biotin complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Dynamic strength of molecular adhesion bonds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Electron-crystallographic refinement of the structure of bacteriorhodopsin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Comparative protein modelling by satisfaction of spatial restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

9 July 2018

Adhesion forces between individual ligand-receptor pairs

1 reference

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9 July 2018

Models for the Specific Adhesion of Cells to Cells

1 reference

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9 July 2018

Mechanical unfolding revisited through a simple but realistic model.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

27 September 2018

Probing the energy landscape of the membrane protein bacteriorhodopsin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

27 September 2018

The mechanical stability of ubiquitin is linkage dependent

1 reference

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27 September 2018

Effective energy function for proteins in lipid membranes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1614499

27 September 2018

Characterizing molecular interactions in different bacteriorhodopsin assemblies by single-molecule force spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/16861280

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probing origins of molecular interactions stabilizing the membrane proteins halorhodopsin and bacteriorhodopsin

1 reference

https://pubmed.ncbi.nlm.nih.gov/16861280

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unfolding barriers in bacteriorhodopsin probed from the cytoplasmic and the extracellular side by AFM

1 reference

https://pubmed.ncbi.nlm.nih.gov/16861280

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Energy landscapes of receptor-ligand bonds explored with dynamic force spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/16861280

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tuning the Mechanical Stability of Fibronectin Type III Modules through Sequence Variations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16861280

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanical Unfolding of a Titin Ig Domain: Structure of Transition State Revealed by Combining Atomic Force Microscopy, Protein Engineering and Molecular Dynamics Simulations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16861280

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1529/BIOPHYSJ.106.088591

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Europe PubMed Central

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27 December 2019

PMC publication ID

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16861280%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16861280%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

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