(Q35096326)

6 August 2017

title

Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp. strain JS614 (English)

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6 August 2017

16

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17

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Alla Lapidus

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ORCID Public Data File 2021

Tijana Glavina Del Rio

9

Tijana Glavina Del Rio

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Roxanne Tapia

24

Roxanne Tapia

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Kerrie Barry

Kerrie Barry

3

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Sam Pitluck

21

Sam Pitluck

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6 August 2017

20

Susan Lucas

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6 August 2017

8

John C Detter

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6 August 2017

6

Alex Copeland

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6 August 2017

13

Loren J Hauser

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6 August 2017

5

David C Bruce

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6 August 2017

12

Shunsheng Han

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6 August 2017

11

Nancy M Hammon

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6 August 2017

7

Eileen Dalin

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6 August 2017

23

Jeremy Schmutz

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6 August 2017

19

Frank W Larimer

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6 August 2017

14

Sanjay Israni

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6 August 2017

15

Edwin Kim

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6 August 2017

10

Lynne A Goodwin

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6 August 2017

Nicholas V Coleman

1

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6 August 2017

Neil L Wilson

2

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6 August 2017

Thomas S Brettin

4

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6 August 2017

Paul Richardson

22

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6 August 2017

Sue Thompson

25

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6 August 2017

Hope N Tice

26

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6 August 2017

Jim C Spain

27

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6 August 2017

James G Gossett

28

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6 August 2017

Timothy E Mattes

29

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6 August 2017

language of work or name

English

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publication date

6 May 2011

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6 August 2017

number of pages

2

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based on heuristic

inferred from page(s)

published in

Journal of Bacteriology

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6 August 2017

volume

193

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6 August 2017

issue

13

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6 August 2017

page(s)

3399-3400

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Aerobic biodegradation of the chloroethenes: pathways, enzymes, ecology, and evolution

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Getting a handle on the role of coenzyme M in alkene metabolism

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Identification of polypeptides expressed in response to vinyl chloride, ethene, and epoxyethane in Nocardioides sp. strain JS614 by using peptide mass fingerprinting

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Complete nucleotide sequence of the 113-kilobase linear catabolic plasmid pAL1 of Arthrobacter nitroguajacolicus Rü61a and transcriptional analysis of genes involved in quinaldine degradation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Physiological and molecular genetic analyses of vinyl chloride and ethene biodegradation in Nocardioides sp. strain JS614.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Improved prediction of signal peptides: SignalP 3.0

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Phylogenetic and kinetic diversity of aerobic vinyl chloride-assimilating bacteria from contaminated sites

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Characterization of JP-7 jet fuel degradation by the bacterium Nocardioides luteus strain BAFB.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Characterization of an isolate that uses vinyl chloride as a growth substrate under aerobic conditions

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Characterization of S-triazine herbicide metabolism by a Nocardioides sp. isolated from agricultural soils

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Vinyl chloride: still a cause for concern

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Improved microbial gene identification with GLIMMER

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

CRITICA: coding region identification tool invoking comparative analysis

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Nocardioides nitrophenolicus sp. nov., a p-nitrophenol-degrading bacterium

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Extending the alkene substrate range of vinyl chloride utilizing Nocardioides sp. strain JS614 with ethene oxide

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Gaseous alkene biotransformation and enantioselective epoxyalkane formation by Nocardioides sp. strain JS614.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Utilization of fluoroethene as a surrogate for aerobic vinyl chloride transformation

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Mechanism controlling the extended lag period associated with vinyl chloride starvation in Nocardioides sp. strain JS614.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Biodegradation of vinyl chloride and cis-dichloroethene by a Ralstonia sp. strain TRW-1.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Isolation and characterization of alkane-utilizing Nocardioides sp. strain CF8.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3133255

Mineralization of 2,4,6-trinitrophenol (picric acid): characterization and phylogenetic identification of microbial strains

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21551312

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JB.05109-11

1 reference

6 August 2017

1 reference

6 August 2017

1 reference