(Q35107969)

6 August 2017

title

Sequence analysis of three mitochondrial DNA molecules reveals interesting differences among Saccharomyces yeasts (English)

1 reference

6 August 2017

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4

C Gaillardin

1 reference

6 August 2017

R B Langkjaer

1

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6 August 2017

S Casaregola

series ordinal

2

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6 August 2017

D W Ussery

series ordinal

3

1 reference

6 August 2017

J Piskur

series ordinal

5

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6 August 2017

language of work or name

English

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publication date

1 June 2003

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6 August 2017

published in

Nucleic Acids Research

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6 August 2017

volume

31

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6 August 2017

issue

12

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6 August 2017

page(s)

3081-3091

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The complete mitochondrial genome of yarrowia lipolytica

6 August 2017

cites work

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9 July 2018

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9 July 2018

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9 July 2018

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9 July 2018

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Linear mitochondrial genomes: 30 years down the line

9 July 2018

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Usage of non-canonical promoter sequence by the yeast mitochondrial RNA polymerase

9 July 2018

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Consed: a graphical tool for sequence finishing

9 July 2018

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Base-calling of automated sequencer traces using phred. II. Error probabilities

9 July 2018

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

9 July 2018

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9 July 2018

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Homing endonucleases: keeping the house in order

9 July 2018

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

9 July 2018

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Mechanisms of tRNA import into yeast mitochondria: an overview

9 July 2018

1 reference

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Introns as mobile genetic elements

9 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

The structure of the small mitochondrial DNA of Kluyveromyces thermotolerans is likely to reflect the ancestral gene order in fungi

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Inheritance of the yeast mitochondrial genome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

The ori sequences of the mitochondrial genome of a wild-type yeast strain: number, location, orientation and structure.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Processing of yeast mitochondrial messenger RNAs at a conserved dodecamer sequence

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Sequence of the intron and flanking exons of the mitochondrial 21S rRNA gene of yeast strains having different alleles at the ω and rib-1 loci

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Identification of a single transcriptional initiation site for the glutamic tRNA and COB genes in yeast mitochondria

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

The initiation of DNA replication in the mitochondrial genome of yeast

9 July 2018

1 reference

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Expression of the clustered mitochondrial tRNA genes in Saccharomyces cerevisiae: transcription and processing of transcripts

9 July 2018

1 reference

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Location of transcriptional control signals and transfer RNA sequences in Torulopsis glabrata mitochondrial DNA.

9 July 2018

1 reference

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Sequence organization of the mitochondrial genome of yeast--a review

9 July 2018

1 reference

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var1 Gene on the mitochondrial genome of Torulopsis glabrata

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Structural conventions for group I introns

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Natural variation in the genetic code

9 July 2018

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Improved tools for biological sequence comparison

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Analysis of the regions coding for transfer RNAs in Kluyveromyces lactis mitochondrial DNA

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

In vivo rearrangement of mitochondrial DNA in Saccharomyces cerevisiae

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Nucleo-mitochondrial interactions in yeast mitochondrial biogenesis

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Group I introns as mobile genetic elements: facts and mechanistic speculations--a review

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Mobile introns: definition of terms and recommended nomenclature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

The complete DNA sequence of the mitochondrial genome of Podospora anserina.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Self-splicing of group I introns

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Dramatic size variation of yeast mitochondrial RNAs suggests that RNase P RNAs can be quite small

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

A gene required for RNase P activity in Candida (Torulopsis) glabrata mitochondria codes for a 227-nucleotide RNA with homology to bacterial RNase P RNA

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

A novel type of + 1 frameshift suppressor: a base substitution in the anticodon stem of a yeast mitochondrial serine-tRNA causes frameshift suppression.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Recent evidence for evolution of the genetic code

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Evolution of mitochondrial genomes in fungi

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Assembly of the mitochondrial membrane system: sequences of yeast mitochondrial valine and an unusual threonine tRNA gene

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Inheritance and organisation of the mitochondrial genome differ between two Saccharomyces yeasts.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Genomic exploration of the hemiascomycetous yeasts: 7. Saccharomyces servazzii

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Diversity in organization and the origin of gene orders in the mitochondrial DNA molecules of the genus Saccharomyces

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Structure and genetic stability of mitochondrial genomes vary among yeasts of the genus Saccharomyces

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

The complete mitochondrial DNA sequence of Hansenula wingei reveals new characteristics of yeast mitochondria.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Larger rearranged mitochondrial genomes in Dekkera/Brettanomyces yeasts are more closely related than smaller genomes with a conserved gene order.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

The mitochondrial genome of yeast Hansenula wingei encodes NADH dehydrogenase subunit genes ND4L and ND5.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Location and structure of the var1 gene on yeast mitochondrial DNA: nucleotide sequence of the 40.0 allele.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Characterization of the yeast mitochondrial locus necessary for tRNA biosynthesis: DNA sequence analysis and identification of a new transcript

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Single base substitution in an intron of oxidase gene compensates splicing defects of the cytochrome b gene.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=162263

Translation of synonymous codons in family boxes by Mycoplasma capricolum tRNAs with unmodified uridine or adenosine at the first anticodon position

27 September 2018

1 reference

12 December 2020

The GC clusters of the mitochondrial genome of yeast and their evolutionary origin

1 reference

12 December 2020

Genomic Exploration of the Hemiascomycetous Yeasts: 21. Comparative functional classification of genes

1 reference

12 December 2020

Three views of microbial genomes

1 reference

12 December 2020

Molecular basis of the 'box effect'. A maturase deficiency leading to the absence of splicing of two introns located in two split genes of yeast mitochondrial DNA

1 reference

12 December 2020

Sequences and classification of group I and group II introns

1 reference

12 December 2020

The evolution of the RNase P- and RNase MRP-associated RNAs: phylogenetic analysis and nucleotide substitution rate

1 reference

12 December 2020

Origins of transcripts of the yeast mitochondrial var 1 gene

1 reference

12 December 2020

Order and orientation of genic sequences in circular mitochondrial DNA fromSaccharomyces exiguus: Implications for evolution of yeast mtDNAs

1 reference

12 December 2020

Leaky +1 and −1 frameshift mutations at the same site in a yeast mitochondrial gene

1 reference

12 December 2020

An approach to yeast classification by mapping mitochondrial DNA from Dekkera/Brettanomyces and Eeniella genera

1 reference

12 December 2020

Mobile elements in the yeast mitochondrial genome

1 reference

12 December 2020

Mapping of mitochondrial DNA from Torulopsis glabrata

1 reference

12 December 2020

Transcription in yeast mitochondria: Analysis of the 21 S rRNA region and its transcripts

1 reference

12 December 2020

oli1 Transcripts in wild type and in a cytoplasmic “petite” mutant of yeast

1 reference

12 December 2020

Distribution of mitochondrial intron sequences among 21 yeast species

1 reference

12 December 2020

Identification of multiple transcriptional initiation sites on the yeast mitochondrial genome by in vitro capping with guanylyltransferase

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKG423

1 reference

6 August 2017

1 reference

6 August 2017

1 reference