(Q35111710)

6 August 2017

Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution (English)

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6 August 2017

3

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6 August 2017

19

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6 August 2017

John Stamatoyannopoulos

37

object named as

John A Stamatoyannopoulos

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6 August 2017

29

Alexander Rudensky

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6 August 2017

Robert Samstein

23

1 reference

ORCID Public Data File 2021

Evan E. Eichler

25

object named as

Evan E Eichler

1 reference

6 August 2017

17

Morgan Diegel

1 reference

6 August 2017

13

Shinny Vong

1 reference

6 August 2017

18

Erika Giste

1 reference

6 August 2017

4

Miaohua Zhang

1 reference

6 August 2017

2

Eric Rynes

1 reference

6 August 2017

Jeff Vierstra

1

1 reference

6 August 2017

Theresa Canfield

5

1 reference

6 August 2017

R Scott Hansen

6

1 reference

6 August 2017

Sandra Stehling-Sun

7

1 reference

6 August 2017

Peter J Sabo

8

1 reference

6 August 2017

Rachel Byron

9

1 reference

6 August 2017

Richard Humbert

10

1 reference

6 August 2017

Robert E Thurman

11

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6 August 2017

Audra K Johnson

12

1 reference

6 August 2017

Kristen Lee

14

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6 August 2017

Daniel Bates

15

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6 August 2017

Fidencio Neri

16

1 reference

6 August 2017

Douglas Dunn

20

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6 August 2017

Matthew S Wilken

21

1 reference

6 August 2017

Steven Josefowicz

22

1 reference

6 August 2017

Kai-Hsin Chang

24

1 reference

6 August 2017

Marella De Bruijn

26

1 reference

6 August 2017

Thomas A Reh

27

1 reference

6 August 2017

Arthur Skoultchi

28

1 reference

6 August 2017

Stuart H Orkin

30

1 reference

6 August 2017

Thalia Papayannopoulou

31

1 reference

6 August 2017

Piper M Treuting

32

1 reference

6 August 2017

Licia Selleri

33

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6 August 2017

Rajinder Kaul

34

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6 August 2017

Mark Groudine

35

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6 August 2017

M A Bender

36

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6 August 2017

language of work or name

English

0 references

publication date

1 November 2014

1 reference

6 August 2017

1 reference

6 August 2017

346

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6 August 2017

1007-1012

1 reference

6 August 2017

6212

1 reference

Conservation of trans-acting circuitry during mammalian regulatory evolution

6 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Comprehensive characterization of erythroid-specific enhancers in the genomic regions of human Krüppel-like factors

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Developmental fate and cellular maturity encoded in human regulatory DNA landscapes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Genome-scale mapping of DNase I hypersensitivity

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The majority of primate-specific regulatory sequences are derived from transposable elements

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

DNA-binding specificities of human transcription factors

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The UCSC Genome Browser database: extensions and updates 2013.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

GENCODE: the reference human genome annotation for The ENCODE Project

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Personal and population genomics of human regulatory variation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Systematic localization of common disease-associated variation in regulatory DNA

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The accessible chromatin landscape of the human genome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

An integrated encyclopedia of DNA elements in the human genome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

BEDOPS: high-performance genomic feature operations

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

ETS-dependent regulation of a distal Gata4 cardiac enhancer

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

FIMO: scanning for occurrences of a given motif

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

A map of human genome variation from population-scale sequencing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The NIH Roadmap Epigenomics Mapping Consortium

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

GREAT improves functional interpretation of cis-regulatory regions

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

MEME SUITE: tools for motif discovery and searching

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Evolution of the mammalian transcription factor binding repertoire via transposable elements

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The delayed rise of present-day mammals

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Quantifying similarity between motifs

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Using genomic data to unravel the root of the placental mammal phylogeny

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Widespread Alu repeat-driven expansion of consensus DR2 retinoic acid response elements during primate evolution

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Repbase Update, a database of eukaryotic repetitive elements

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Initial sequencing and comparative analysis of the mouse genome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The origin and evolution of model organisms

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Initial sequencing and analysis of the human genome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Mouse models for human disease

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Precise developmental regulation of Ets family transcription factors during specification and commitment to the T cell lineage

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Identification and characterization of a gene encoding a gut-enriched Krüppel-like factor expressed during growth arrest

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Role of gene order in developmental control of human gamma- and beta-globin gene expression

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

DNA-binding specificity of GATA family transcription factors

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The robustness and evolvability of transcription factor binding sites.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Ebf1 controls early cell differentiation in the embryonic striatum.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

Mef2 gene expression marks the cardiac and skeletal muscle lineages during mouse embryogenesis.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4337786

The general affinity of lac repressor for E. coli DNA: Implications for gene regulation in procaryotes and eucaryotes

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25411453

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1246426

1 reference

6 August 2017

1 reference

6 August 2017

1 reference