(Q35137062)

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Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

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scholarly article

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Europe PubMed Central

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6 August 2017

Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies (English)

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Europe PubMed Central

PubMed publication ID

6 August 2017

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population genetics

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based on heuristic

inferred from title

1

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12 June 2020

2

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12 June 2020

12

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12 June 2020

Thomas Louis Peter Couvreur

13

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12 June 2020

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Juliette Pouzadou

3

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12 June 2020

Adeline Barnaud

4

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12 June 2020

Claire Billot

5

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12 June 2020

Adama Faye

6

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12 June 2020

Ayite Kougbeadjo

7

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12 June 2020

Vincent Maillol

8

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12 June 2020

Guillaume Martin

9

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12 June 2020

François Sabot

10

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12 June 2020

Sylvain Santoni

11

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12 June 2020

publication date

23 April 2014

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6 August 2017

Molecular Ecology Resources

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12 June 2020

14

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12 June 2020

6

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12 June 2020

1103-1113

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12 June 2020

Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform

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https://api.crossref.org/works/10.1111%2F1755-0998.12258

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Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology

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Ultra-barcoding in cacao (Theobroma spp.; Malvaceae) using whole chloroplast genomes and nuclear ribosomal DNA.

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Fast and accurate short read alignment with Burrows-Wheeler transform

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The Sequence Alignment/Map format and SAMtools

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21 January 2018

Target-enrichment strategies for next-generation sequencing

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12258

21 January 2018

Applications of next-generation sequencing to phylogeography and phylogenetics

1 reference

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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

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Using Tablet for visual exploration of second-generation sequencing data

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Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms

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Targeted capture and massively parallel sequencing of 12 human exomes

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Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

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Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

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21 January 2018

Variable amounts of DNA related to the size of chloroplasts III. Biochemical determinations of DNA amounts per organelle.

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Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture

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A set of 100 chloroplast DNA primer pairs to study population genetics and phylogeny in monocotyledons

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An improved chloroplast DNA extraction procedure for whole plastid genome sequencing

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Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.

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A targeted enrichment strategy for massively parallel sequencing of angiosperm plastid genomes

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A long PCR-based approach for DNA enrichment prior to next-generation sequencing for systematic studies

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Next-generation sequencing technologies and their implications for crop genetics and breeding

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Finding a (pine) needle in a haystack: chloroplast genome sequence divergence in rare and widespread pines

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21 January 2018

Comparative chloroplast genomes of camellia species

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High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)

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Diversity of wild and cultivated pearl millet accessions (Pennisetum glaucum [L.] R. Br.) in Niger assessed by microsatellite markers

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Genetic Nature of Yams (Dioscorea sp.) Domesticated by Farmers in Benin (West Africa)

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