(Q35178113)

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Sequence artefacts in a prospective series of formalin-fixed tumours tested for mutations in hotspot regions by massively parallel sequencing

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scholarly article

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Europe PubMed Central

PubMed publication ID

7 August 2017

Sequence artefacts in a prospective series of formalin-fixed tumours tested for mutations in hotspot regions by massively parallel sequencing (English)

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Europe PubMed Central

PubMed publication ID

7 August 2017

11

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6 June 2020

Alexander Dobrovic

15

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6 June 2020

Stephen Q. Wong

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6 June 2020

2

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6 June 2020

Ravikiran Vedururu

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6 June 2020

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6 June 2020

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6 June 2020

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Jia-Min B Pang

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6 June 2020

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Ken Doig

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6 June 2020

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John P Parisot

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6 June 2020

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Angela Y-C Tan

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6 June 2020

Hongdo Do

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6 June 2020

Anthony Bell

9

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6 June 2020

Grant A MacArthur

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6 June 2020

Andrew Fellowes

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6 June 2020

CANCER 2015 Cohort

16

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6 June 2020

publication date

13 May 2014

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7 August 2017

BMC Medical Genomics

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6 June 2020

7

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6 June 2020

23

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6 June 2020

https://scigraph.springernature.com/pub.10.1186/1755-8794-7-23

0 references

Targeted-capture massively-parallel sequencing enables robust detection of clinically informative mutations from formalin-fixed tumours

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032349

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Intratumoral genetic heterogeneity in metastatic melanoma is accompanied by variation in malignant behaviors

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28 July 2018

Functional DNA quantification guides accurate next-generation sequencing mutation detection in formalin-fixed, paraffin-embedded tumor biopsies

1 reference

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A phase Ib combination study of RO4929097, a gamma-secretase inhibitor, and temsirolimus in patients with advanced solid tumors

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28 July 2018

Comparison of clinical targeted next-generation sequence data from formalin-fixed and fresh-frozen tissue specimens

1 reference

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28 July 2018

MEK162 for patients with advanced melanoma harbouring NRAS or Val600 BRAF mutations: a non-randomised, open-label phase 2 study

1 reference

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28 July 2018

Detection of ultra-rare mutations by next-generation sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032349

28 July 2018

Dramatic reduction of sequence artefacts from DNA isolated from formalin-fixed cancer biopsies by treatment with uracil- DNA glycosylase

1 reference

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28 July 2018

High-throughput detection of actionable genomic alterations in clinical tumor samples by targeted, massively parallel sequencing

1 reference

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28 July 2018

Identification of high-confidence somatic mutations in whole genome sequence of formalin-fixed breast cancer specimens

1 reference

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28 July 2018

Targeting NRAS in melanoma

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28 July 2018

PIK3CA mutation impact on survival in breast cancer patients and in ERα, PR and ERBB2-based subgroups

1 reference

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28 July 2018

PI3K/AKT/mTOR inhibitors in patients with breast and gynecologic malignancies harboring PIK3CA mutations

1 reference

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28 July 2018

Targeted high throughput sequencing in clinical cancer settings: formaldehyde fixed-paraffin embedded (FFPE) tumor tissues, input amount and tumor heterogeneity

1 reference

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28 July 2018

Use of formalin-fixed and paraffin-embedded tissues for diagnosis and therapy in routine clinical settings

1 reference

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28 July 2018

Clinical implications of the cancer genome

1 reference

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28 July 2018

Profiling critical cancer gene mutations in clinical tumor samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032349

28 July 2018

Limited copy number-high resolution melting (LCN-HRM) enables the detection and identification by sequencing of low level mutations in cancer biopsies

1 reference

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28 July 2018

Genome-wide massively parallel sequencing of formaldehyde fixed-paraffin embedded (FFPE) tumor tissues for copy-number- and mutation-analysis

1 reference

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28 July 2018

The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?

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28 July 2018

DNA damage reduces Taq DNA polymerase fidelity and PCR amplification efficiency

1 reference

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28 July 2018

Mutations induced by ultraviolet light

1 reference

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Heat-induced formation of reactive oxygen species and 8-oxoguanine, a biomarker of damage to DNA.

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Instability and decay of the primary structure of DNA

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Reducing Sequence Artifacts in Amplicon-Based Massively Parallel Sequencing of Formalin-Fixed Paraffin-Embedded DNA by Enzymatic Depletion of Uracil-Containing Templates

1 reference

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21 January 2018

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10.1186/1755-8794-7-23

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Europe PubMed Central

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6 June 2020

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6 June 2020

PubMed publication ID

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6 June 2020

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