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YrdC exhibits properties expected of a subunit for a tRNA threonylcarbamoyl transferase.
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Europe PubMed Central
PMC publication ID
3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 February 2020
title
YrdC exhibits properties expected of a subunit for a tRNA threonylcarbamoyl transferase
(English)
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Europe PubMed Central
PMC publication ID
3162333
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 February 2020
author
Kimberly A Harris
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1
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3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
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8 February 2020
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Victoria Jones
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2
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PMC publication ID
3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
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8 February 2020
Yann Bilbille
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3
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3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
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8 February 2020
Manal A Swairjo
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4
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3162333
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8 February 2020
Paul F Agris
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5
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PMC publication ID
3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
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8 February 2020
language of work or name
English
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publication date
20 July 2011
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Europe PubMed Central
PMC publication ID
3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 February 2020
published in
RNA
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PMC publication ID
3162333
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
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8 February 2020
volume
17
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8 February 2020
issue
9
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Europe PubMed Central
PMC publication ID
3162333
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retrieved
8 February 2020
page(s)
1678-1687
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Europe PubMed Central
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3162333
reference URL
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8 February 2020
cites work
The highly conserved KEOPS/EKC complex is essential for a universal tRNA modification, t6A.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The Sua5 protein is essential for normal translational regulation in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Snapshots of Dynamics in Synthesizing N 6 -Isopentenyladenosine at the tRNA Anticodon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The universal YrdC/Sua5 family is required for the formation of threonylcarbamoyladenosine in tRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
RNA-Protein Mutually Induced Fit: STRUCTURE OF ESCHERICHIA COLI ISOPENTENYL-tRNA TRANSFERASE IN COMPLEX WITH tRNA(Phe)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
tRNAdb 2009: compilation of tRNA sequences and tRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Bringing order to translation: the contributions of transfer RNA anticodon-domain modifications
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Structure, dynamics, and function of RNA modification enzymes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Anticodon domain modifications contribute order to tRNA for ribosome-mediated codon binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Post-transcriptional nucleotide modification and alternative folding of RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The YrdC protein--a putative ribosome maturation factor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Temperature sensitivity caused by mutant release factor 1 is suppressed by mutations that affect 16S rRNA maturation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Decoding the genome: a modified view
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Isolation and identification of a novel cDNA that encodes human yrdC protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Estimation of dissociation constant of enzyme-ligand complex from fluorometric data by "difference" method
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Improvement of reading frame maintenance is a common function for several tRNA modifications
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The structure of theyrdCgene product fromEscherichia colireveals a new fold and suggests a role in RNA binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Probing structure and dynamics of DNA with 2-aminopurine: effects of local environment on fluorescence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Structural and functional roles of the N1- and N3-protons of psi at tRNA's position 39
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Stabilization of the anticodon stem-loop of tRNALys,3 by an A+-C base-pair and by pseudouridine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The importance of being modified: roles of modified nucleosides and Mg2+ in RNA structure and function.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Effect of threonylcarbamoyl modification (t6A) in yeast tRNA Arg III on codon-anticodon and anticodon-anticodon interactions. A thermodynamic and kinetic evaluation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The enzymatic synthesis of N-(purin-6-ylcarbamoyl)threonine, an anticodon-adjacent base in transfer ribonucleic acid
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
N-(purin-6-ylcarbamoyl)threonine: Biosynthesis in vitro in transfer RNA by an enzyme purified fromEscherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Biosynthesis and specific labeling of N-(purin-6-ylcarbamoyl)threonine of Escherichiacoli transfer RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Isolation and characterization of SUA5, a novel gene required for normal growth in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
The involvement of the anticodon adjacent modified nucleoside N-(9-(BETA-D-ribofuranosyl) purine-6-ylcarbamoyl)-threonine in the biological function of E. coli tRNAile
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
28 July 2018
Snapshots of tRNA sulphuration via an adenylated intermediate.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
The role of modifications in codon discrimination by tRNA(Lys)UUU.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
MnmA and IscS are required for in vitro 2-thiouridine biosynthesis in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Accurate translation of the genetic code depends on tRNA modified nucleosides.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Experimental models of protein-RNA interaction: isolation and analyses of tRNA(Phe) and U1 snRNA-binding peptides from bacteriophage display libraries
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
BASE FLIPPING
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Unconventional structure of tRNA(Lys)SUU anticodon explains tRNA's role in bacterial and mammalian ribosomal frameshifting and primer selection by HIV-1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Molecular recognition of the identity-determinant set of isoleucine transfer RNA from Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Biosynthesis of N-(purin-6-ylcarbamoyl)-l-threonine riboside. Incorporation of l-threonine in vivo into modified nucleoside of transfer ribonucleic acid
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Minor components in transfer RNA: their characterization, location, and function.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3162333
retrieved
27 September 2018
Characterization of Ligand Binding by Saturation Transfer Difference NMR Spectroscopy
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21775474
retrieved
12 December 2020
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Identifiers
DOI
10.1261/RNA.2592411
1 reference
stated in
Europe PubMed Central
PMC publication ID
3162333
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 February 2020
PMC publication ID
3162333
1 reference
stated in
Europe PubMed Central
PMC publication ID
3162333
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 February 2020
PubMed publication ID
21775474
1 reference
stated in
Europe PubMed Central
PMC publication ID
3162333
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775474%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 February 2020
ResearchGate publication ID
51508035
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