(Q40998399)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

16 October 2019

review article

1 reference

title

The importance of being modified: roles of modified nucleosides and Mg2+ in RNA structure and function (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

16 October 2019

author name string

Agris PF

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

16 October 2019

language of work or name

1 reference

1 January 1996

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

Progress in Molecular Biology and Translational Science

16 October 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

16 October 2019

volume

53

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

16 October 2019

page(s)

79-129

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8650309%20AND%20SRC:MED&resulttype=core&format=json

Wobble position modified nucleosides evolved to select transfer RNA codon recognition: A modified-wobble hypothesis

16 October 2019

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Modification of tRNA as a regulatory device

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CpG-rich islands and the function of DNA methylation

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7 January 2021

Involvement of the anticodon region of Escherichia coli tRNAGln and tRNAGlu in the specific interaction with cognate aminoacyl-tRNA synthetase. Alteration of the 2-thiouridine derivatives located in the anticodon of the tRNAs by BrCN or sulfur depri

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7 January 2021

Aminoacylation of transfer RNAs with 2-thiouridine derivatives in the wobble position of the anticodon

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7 January 2021

Change in methylation of 16S ribosomal RNA associated with mutation to kasugamycin resistance in Escherichia coli

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7 January 2021

Pseudouridine and O2'-methylated nucleosides. Significance of their selective occurrence in rRNA domains that function in ribosome-catalyzed synthesis of the peptide bonds in proteins

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7 January 2021

Alterations in tRNA isoaccepting species during erythroid differentiation of the Friend leukemia cell.

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7 January 2021

Specific changes in Q-ribonucleoside containing transfer RNA species during Friend leukemia cell erythroid differentiation.

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7 January 2021

Summary: the modified nucleosides of RNA.

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7 January 2021

Defects in modification of cytoplasmic and mitochondrial transfer RNAs are caused by single nuclear mutations

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7 January 2021

Isopentenyladenosine deficient tRNA from an antisuppressor mutant of Saccharomyces cerevisiae

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7 January 2021

The effect of an Escherichia coli regulatory mutation on transfer RNA structure

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7 January 2021

The antisuppressor strain sin1 of Schizosaccharomyces pombe lacks the modification isopentenyladenosine in transfer RNA

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7 January 2021

In vivo decoding rules in Schizosaccharomyces pombe are at variance with in vitro data

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7 January 2021

Overlapping nucleotide determinants for specific aminoacylation of RNA microhelices.

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7 January 2021

RNA tetraloops as minimalist substrates for aminoacylation

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7 January 2021

Small RNA helices as substrates for aminoacylation and their relationship to charging of transfer RNAs

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7 January 2021

Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro

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7 January 2021

Aminoacyl-tRNA synthetases

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7 January 2021

In vitro study of E.coli tRNA(Arg) and tRNA(Lys) identity elements

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7 January 2021

Conformational activation of aminoacyl-tRNA synthetases upon binding of tRNA. A facet of a multi-step adaptation process leading to the optimal biological activity

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7 January 2021

Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification

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7 January 2021

Recognition of the Anticodon Loop of tRNAIle1by Isoleucyl-tRNA Synthetase fromEscherichia coli

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7 January 2021

Relaxation of a transfer RNA specificity by removal of modified nucleotides

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7 January 2021

A single methyl group prevents the mischarging of a tRNA

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7 January 2021

Presence of phosphorylated O-ribosyl-adenosine in T-psi-stem of yeast methionine initiator tRNA.

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7 January 2021

The role of modified purine 64 in initiator/elongator discrimination of tRNA(iMet) from yeast and wheat germ

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7 January 2021

Discrimination between initiation and elongation of protein biosynthesis in yeast: identity assured by a nucleotide modification in the initiator tRNA

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7 January 2021

Interaction of ribo- and deoxyriboanalogs of yeast tRNA(Phe) anticodon arm with programmed small ribosomal subunits of Escherichia coli and rabbit liver

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7 January 2021

Decoding with the A:I wobble pair is inefficient

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7 January 2021

Presence of the hypermodified nucleotide N6-(delta 2-isopentenyl)-2-methylthioadenosine prevents codon misreading by Escherichia coli phenylalanyl-transfer RNA.

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7 January 2021

Temperature jump relaxation studies on the interactions between transfer RNAs with complementary anticodons. The effect of modified bases adjacent to the anticodon triplet.

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7 January 2021

Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine.

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7 January 2021

The where, what and how of ribosomal frameshifting in retroviral protein synthesis

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7 January 2021

Translational efficiency of transfer RNA's: uses of an extended anticodon

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7 January 2021

In vitro biosynthesis of pseudouridine at the polynucleotide level by an enzyme extract from Escherichia coli

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7 January 2021

Comparative structural analysis of 1-methyladenosine, 7-methylguanosine, ethenoadenosine and their protonated salts IV: 1H, 13C, and 15N NMR studies at natural isotope abundance

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7 January 2021

Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".

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7 January 2021

A novel method for the determination of post-transcriptional modification in RNA by mass spectrometry

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7 January 2021

Verification of 50- to 100-mer DNA and RNA sequences with high-resolution mass spectrometry

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7 January 2021

Conformatzonal Properties of a Novel Modified Nucleoside, 5-Formylcytidine, Found at the First Position of the Anticodon of Bovine Mitochondrial tRNAMet

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7 January 2021

Enzymatic formation of N2,N2-dimethylguanosine in eukaryotic tRNA: importance of the tRNA architecture.

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7 January 2021

tRNA-m1G methyltransferase interactions: touching bases with structure

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7 January 2021

Three-Dimensional Tertiary Structure of Yeast Phenylalanine Transfer RNA

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7 January 2021

Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution

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7 January 2021

Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)

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7 January 2021

The 2.9 A crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser)

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7 January 2021

Preparation of 13C and 15N labelled RNAs for heteronuclear multi-dimensional NMR studies

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7 January 2021

Preparation of isotopically labeled ribonucleotides for multidimensional NMR spectroscopy of RNA.

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7 January 2021

Site-selected introduction of modified purine and pyrimidine ribonucleosides into RNA by automated phosphoramidite chemistry.

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7 January 2021

Chemical synthesis of a biologically active natural tRNA with its minor bases

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7 January 2021

Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex

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7 January 2021

Improvement in the synthesis of oligonucleotides of extended length by modification of detritylation step

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7 January 2021

On the rapid deprotection of synthetic oligonucleotides and analogs

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7 January 2021

Synthetic oligoribonucleotides carrying site-specific modifications for RNA structure-function analysis

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7 January 2021

The automated chemical synthesis of long oligoribuncleotides using 2'-O-silylated ribonucleoside 3'-O-phosphoramidites on a controlled-pore glass support: synthesis of a 43-nucleotide sequence similar to the 3'-half molecule of an Escherichia coli fo

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7 January 2021

Aminoacyl-tRNA synthetase and U54 methyltransferase recognize conformations of the yeast tRNA(Phe) anticodon and T stem/loop domain

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7 January 2021

RNA structure and NMR spectroscopy

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7 January 2021

Structural Features that Give Rise to the Unusual Stability of RNA Hairpins Containing GNRA Loops

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7 January 2021

The three-dimensional structure of a DNA hairpin in solution two-dimensional NMR studies and structural analysis of d(ATCCTATTTATAGGAT).

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7 January 2021

Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin

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7 January 2021

Thermodynamic parameters for loop formation in RNA and DNA hairpin tetraloops

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7 January 2021

Effect of threonylcarbamoyl modification (t6A) in yeast tRNA Arg III on codon-anticodon and anticodon-anticodon interactions. A thermodynamic and kinetic evaluation

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7 January 2021

Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes

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7 January 2021

Mechanism of codon recognition by transfer RNA and codon-induced tRNA association

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7 January 2021

Design, biological activity and NMR-solution structure of a DNA analogue of yeast tRNA(Phe) anticodon domain

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7 January 2021

Crystal structure of yeast phenylalanine transfer RNA. II. Structural features and functional implications

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7 January 2021

Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G

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7 January 2021

Effect of nucleoside modifications on the structure and thermal stability of Escherichia coli valine tRNA.

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7 January 2021

Structural analysis of spermine and magnesium ion binding to yeast phenylalanine transfer RNA

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7 January 2021

The three conformations of the anticodon loop of yeast tRNA(Phe)

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7 January 2021

Nucleotides in yeast tRNAPhe required for the specific recognition by its cognate synthetase

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7 January 2021

Anticodon-independent aminoacylation of an RNA minihelix with valine

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7 January 2021

Binding of yeast tRNAphe anticodon arm to Escherichia coli 30 S ribosomes

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7 January 2021

DNA bending by asymmetric phosphate neutralization

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7 January 2021

Unusual anticodon loop structure found in E.coli lysine tRNA.

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7 January 2021

Stabilization of RNA structure by Mg ions. Specific and non-specific effects.

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7 January 2021

Bases defining an ammonium and magnesium ion-dependent tertiary structure within the large subunit ribosomal RNA.

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7 January 2021

The combination of symbolic and numerical computation for three-dimensional modeling of RNA.

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7 January 2021

Modeling the three-dimensional structure of RNA.

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7 January 2021

A genetic algorithm based molecular modeling technique for RNA stem-loop structures

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7 January 2021

10.1016/S0079-6603(08)60143-9

Identifiers

DOI

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1 reference