(Q36713130)

15 August 2017

1 reference

title

RNA structure and NMR spectroscopy (English)

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15 August 2017

0 references

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Varani G

1

1 reference

PubMed ID

1723809

15 August 2017

Tinoco I Jr

series ordinal

2

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15 August 2017

1 November 1991

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Quarterly Reviews of Biophysics

15 August 2017

1 reference

15 August 2017

24

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15 August 2017

479-532

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15 August 2017

4

1 reference

Determination of solution conformation of DNA backbone: application of homonuclear (J, delta) spectroscopy

15 August 2017

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Extraordinary stable structure of short single-stranded DNA fragments containing a specific base sequence: d(GCGAAAGC).

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

The solution structure of yeast tRNAPhe as studied by nuclear Overhauser effects in NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Sequence-dependent structural variations of hammerhead RNA enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Structural Features that Give Rise to the Unusual Stability of RNA Hairpins Containing GNRA Loops

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

An evaluation of the combined use of nuclear magnetic resonance and distance geometry for the determination of protein conformations in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

On loop folding in nucleic acid hairpin-type structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Two-dimensional COSY and two-dimensional NOE spectroscopy of d(AC)4.d(GT)4: extraction of structural constraints.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Solution structure studies of d(AC)4.d(GT)4 via restrained molecular dynamics simulations with NMR constraints derived from two-dimensional NOE and double-quantum-filtered COSY experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Complete assignment of the deoxyribose 5'/5" proton resonances of the EcoRI DNA sequence using isotropic mixing

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Secondary structure of 5S RNA: NMR experiments on RNA molecules partially labeled with nitrogen-15.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

RNA pseudoknots. Stability and loop size requirements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Improved free-energy parameters for predictions of RNA duplex stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Protein structure determination in solution by nuclear magnetic resonance spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

A comparison of the solution structures and conformational properties of the somatic and oocyte 5S rRNAs ofXenopus laevis

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: a graphical method

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Two-dimensional proton nuclear magnetic resonance investigation of the synthetic deoxyribonucleic acid decamer d(ATATCGATAT)2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Probing the structure of RNAs in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Direct measurement of oligonucleotide substrate binding to wild-type and mutant ribozymes from Tetrahymena

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

High resolution structure of the RNA duplex [U(U-A)6A]2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Conformation of an RNA pseudoknot

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Solution conformation of an RNA hairpin loop

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Mixed deoxyribo- and ribo-oligonucleotides with catalytic activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Characterization of the secondary structure and melting of a self-cleaved RNA hammerhead domain by proton NMR spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops"

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Multinuclear NMR studies of DNA hairpins. 2. Sequence-dependent structural variations

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Multinuclear NMR studies of DNA hairpins. 1. Structure and dynamics of d(CGCGTTGTTCGCG).

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Identification of phosphate groups important to self-splicing of the Tetrahymena rRNA intron as determined by phosphorothioate substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

15N-labeled 5S RNA. Identification of uridine base pairs in Escherichia coli 5S RNA by 1H-15N multiple quantum NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Prediction of rho-independent Escherichia coli transcription terminators. A statistical analysis of their RNA stem-loop structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Determination of DNA structures by NMR and distance geometry techniques: a computer simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

The solution structure of a RNA pentadecamer comprising the anticodon loop and stem of yeast tRNAPhe. A 500 MHz 1H-n.m.r. study

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

1H NMR assignments and conformational analysis of the oligoribonucleotides CA, CAU, CAUG, ACAUG, and UCAUG: observation of pyrimidine H5-H1' long-range scalar couplings

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Synthesis and NMR study of ribo-oligonucleotides forming a hammerhead-type RNA enzyme system

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Solution structure of an unusually stable RNA hairpin, 5GGAC(UUCG)GUCC

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Conformation and dynamics of an RNA internal loop

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Structure of an unusually stable RNA hairpin

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Nucleic acids and nuclear magnetic resonance

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Tetraloops and RNA folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

21 January 2018

RNA structure prediction

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

CUUCGG hairpins: extraordinarily stable RNA secondary structures associated with various biochemical processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

13C-NMR of ribosyl ApApA, ApApG and ApUpG.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Visualizing the higher order folding of a catalytic RNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Identification of a non-junction phosphodiester that influences an autolytic processing reaction of RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Phylogenetic and genetic evidence for base-triples in the catalytic domain of group I introns

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Determining local conformational variations in DNA. Nuclear magnetic resonance structures of the DNA duplexes d(CGCCTAATCG) and d(CGTCACGCGC) generated using back-calculation of the nuclear Overhauser effect spectra, a distance geometry algorithm an

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Calculation of protein conformations by proton-proton distance constraints. A new efficient algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Two-dimensional nuclear Overhauser effect: complete relaxation matrix analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

500-MHz proton homonuclear Overhauser evidence for additional base pair in the common arm of eukaryotic ribosomal 5S RNA: wheat germ

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Assignment of the 13C nuclear magnetic resonance spectrum of a short DNA-duplex with 1H-detected two-dimensional heteronuclear correlation spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Proton exchange and base-pair kinetics of poly(rA).poly(rU) and poly(rI).poly(rC).

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Formation of a stable triplex from a single DNA strand

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Studies on the structure and stabilizing factor of the CUUCGG hairpin RNA using chemically synthesized oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Effects of base sequence on the loop folding in DNA hairpins

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Thiophosphate interference experiments locate phosphates important for the hammerhead RNA self-cleavage reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Carbon-13 NMR in conformational analysis of nucleic acid fragments. 2. A reparametrization of the Karplus equation for vicinal NMR coupling constants in CCOP and HCOP fragments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Interaction of berenil with the EcoRI dodecamer d(CGCGAATTCGCG)2 in solution studied by NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

5S RNA structure and interaction with transcription factor A. 1. Ribonuclease probe of the structure of 5S RNA from Xenopus laevis oocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

15N labeling of oligodeoxynucleotides for NMR studies of DNA-ligand interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Improved predictions of secondary structures for RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Nuclear magnetic resonance and distance geometry studies of DNA structures in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Sequential assignments for the hydrogen and phosphorus-31 atoms in the backbone of oligonucleotides by two-dimensional nuclear magnetic resonance

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

13C NMR Assignments of the Protonated Carbons of [d(TAGCGCTA)]2by Two-Dimensional Proton-Detected Heteronuclear Correlation

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Heteronuclear two-dimensional15N- and13C-nmr studies of DNA oligomers and their netropsin complexes using indirect proton detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

Wheat germ 5S ribosomal RNA common arm fragment conformations observed by 1H and 31P nuclear magnetic resonance spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Assignment of imino proton spectra of yeast phenylalanine transfer ribonucleic acid

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

NMR and molecular modeling evidence for a G.A mismatch base pair in a purine-rich DNA duplex

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Deuterium labelling in NMR structural analysis of larger proteins

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Assignment of the non-exchangeable proton resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) using two-dimensional nuclear magnetic resonance methods

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Contributions of the PO ester and CO torsion angles of the phosphate group to31P-nuclear magnetic shielding constant in nucleic acids: Theoretical and experimental study of model compounds

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Coherence transfer in deoxyribose sugars produced by isotropic mixing: an improved intraresidue assignment strategy for the two-dimensional NMR spectra of DNA

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Heteronuclear three-dimensional NMR spectroscopy of isotopically labelled biological macromolecules

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

NMR studies of DNA (R+)n.(Y-)n.(Y+)n triple helices in solution: imino and amino proton markers of T.A.T and C.G.C+ base-triple formation

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Solid-phase synthesis and high-resolution NMR studies of two synthetic double-helical RNA dodecamers: r(CGCGAAUUCGCG) and r(CGCGUAUACGCG)

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Conformational studies of d-(AAAAATTTTT)2 using constraints from nuclear overhauser effects and from quantitative analysis of the cross-peak fine structures in two-dimensional 1H nuclear magnetic resonance spectra

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Selective reversible deuteriation of oligodeoxynucleotides: simplification of two-dimensional nuclear Overhauser effect NMR spectral assignment of a non-self-complementary dodecamer duplex

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Three-dimensional solution structure of a DNA duplex containing the BclI restriction sequence: two-dimensional NMR studies, distance geometry calculations, and refinement by back-calculation of the NOESY spectrum

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Conformation of the exocyclic 5'-CH 2 OH in nucleosides and nucleotides in aqueous solution from specific assignments of the H 5' and H 5'' signals in the NMR spectra

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

1H nuclear magnetic resonance assignments for d-(GCATTAATGC)2 using experimental refinements of established procedures

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Heteronuclear filters in two-dimensional [1H,1H]-NMR spectroscopy: combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Assignment of the 31P and 1H resonances in oligonucleotides by two-dimensional NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

500-MHz proton NMR evidence for two solution structures of the common arm base-paired segment of wheat germ 5S ribosomal RNA

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Sequence-specific assignment of the backbone 1H-and 31P-NMR lines in a short DNA duplex with homo- and heteronuclear correlated spectroscopy

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Effects of GA mismatches on the structure and thermodynamics of RNA internal loops

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

Nuclear magnetic resonance studies of the hammerhead ribozyme domain. Secondary structure formation and magnesium ion dependence

1 reference

https://api.crossref.org/works/10.1017%2FS0033583500003875

7 January 2021

10.1017/S0033583500003875

Identifiers

DOI

1 reference

15 August 2017

1 reference

PubMed ID

1723809