(Q35185675)

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DNA supercoiling and transcription control: a model from the study of suppression of the leu-500 mutation in Salmonella typhimurium topA- strains

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scholarly article

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Europe PubMed Central

PubMed publication ID

7 August 2017

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Europe PubMed Central

DNA supercoiling and transcription control: a model from the study of suppression of the leu-500 mutation in Salmonella typhimurium topA- strains (English)

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Salmonella Typhimurium

object named as

Salmonella typhimurium

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based on heuristic

inferred from title

author name string

Hai-Young Wu

1

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Europe PubMed Central

PubMed publication ID

7 August 2017

Ming Fang

2

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Europe PubMed Central

PubMed publication ID

7 August 2017

publication date

1 January 2003

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Europe PubMed Central

PubMed publication ID

7 August 2017

Progress in Molecular Biology and Translational Science

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Europe PubMed Central

PubMed publication ID

7 August 2017

73

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

43-68

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

DNA topology and a minimal set of basal factors for transcription by RNA polymerase II

1 reference

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7 January 2021

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Presence of negative torsional tension in the promoter region of the transcriptionally poised dihydrofolate reductase gene in vivo

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Localized torsional tension in the DNA of human cells

1 reference

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7 January 2021

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inferred from DOI database lookup

DNA supercoiling and prokaryotic transcription

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

DNA topoisomerases

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Topological unwinding of strong and weak promoters by RNA polymerase. A comparison between the lac wild-type and the UV5 sites of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

RNA polymerase unwinds an 11-base pair segment of a phage T7 promoter

1 reference

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7 January 2021

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inferred from DOI database lookup

YY1 transcriptional initiator: protein interactions and association with a DNA site containing unpaired strands

1 reference

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7 January 2021

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TATA box DNA deformation with and without the TATA box-binding protein

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Saturation mutagenesis of the haloarchaeal bop gene promoter: identification of DNA supercoiling sensitivity sites and absence of TFB recognition element and UAS enhancer activity

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

DNA supercoiling and transcription in Escherichia coli: The FIS connection

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

FIS modulates the kinetics of successive interactions of RNA polymerase with the core and upstream regions of the tyrT promoter

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Supercoiling response of the lac ps promoter in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

All three elements of the lac ps promoter mediate its transcriptional response to DNA supercoiling

1 reference

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7 January 2021

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inferred from DOI database lookup

Modulation of transcription by DNA supercoiling: a deletion analysis of the Escherichia coli gyrA and gyrB promoters

1 reference

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inferred from DOI database lookup

Fusions of the Escherichia coli gyrA and gyrB control regions to the galactokinase gene are inducible by coumermycin treatment

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Effect of topological constraint on transcription of ribosomal DNA in Xenopus oocytes. Comparison of plasmid and endogenous genes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Gyrase inhibitors can increase gyrA expression and DNA supercoiling

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Silencing of Escherichia coli bgl promoter by flanking sequence elements.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Antagonistic control of the Escherichia coli bgl promoter by FIS and CAP in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Lac and lambda repressors relieve silencing of the Escherichia coli bgl promoter. Activation by alteration of a repressing nucleoprotein complex

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Enhancement of bacterial gene expression by insertion elements or by mutation in a CAP-cAMP binding site

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Insertion of DNA activates the cryptic bgl operon in E. coli K12

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcriptional activation of the Escherichia coli bgl operon: negative regulation by DNA structural elements near the promoter.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Characterization of the negative elements involved in silencing the bgl operon of Escherichia coli: possible roles for DNA gyrase, H-NS, and CRP-cAMP in regulation.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

ANALYSIS OF UNLINKED SUPPRESSORS OF AN O degrees MUTATION IN SALMONELLA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Suppression of promoter mutations by the pleiotropic supx mutations.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

The Escherichia coli supX locus is topA, the structural gene for DNA topoisomerase I.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcription generates positively and negatively supercoiled domains in the template.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcription-driven supercoiling of DNA: direct biochemical evidence from in vitro studies

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Template supercoiling during ATP-dependent DNA helix tracking: studies with simian virus 40 large tumor antigen

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Supercoiling of the DNA template during transcription

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Supercoiling of intracellular DNA can occur in eukaryotic cells.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Local domains of supercoiling activate a eukaryotic promoter in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Local DNA topology and gene expression: the case of the leu-500 promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Activity of a plasmid-borne leu-500 promoter depends on the transcription and translation of an adjacent gene

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Activation of the leu-500 promoter: a topological domain generated by divergent transcription in a plasmid.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Topological promoter coupling in Escherichia coli: delta topA-dependent activation of the leu-500 promoter on a plasmid

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Activation of the leu-500 promoter by adjacent transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Long-distance effect of downstream transcription on activity of the supercoiling-sensitive leu-500 promoter in a topA mutant of Salmonella typhimurium

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

DNA supercoiling and transcription: topological coupling of promoters.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Activation and silencing of leu-500 promoter by transcription-induced DNA supercoiling in the Salmonella chromosome.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Long-range interaction between two promoters: Activation of the leu-500 promoter by a distant upstream promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Suppression of leu-500 mutation in topA+ Salmonella typhimurium strains. The promoter relay at work.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Organization of Lrp-binding sites upstream of ilvIH in Salmonella typhimurium

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

A large family of bacterial activator proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

High A + T content conserved in DNA sequences upstream of leuABCD in Escherichia coli and Salmonella typhimurium

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

A promoter relay mechanism for sequential gene activation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

E. coli RNA polymerase interacts homologously with two different promoters

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Mapping of single-stranded regions in duplex DNA at the sequence level: single-strand-specific cytosine methylation in RNA polymerase-promoter complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

A 72-base pair AT-rich DNA sequence element functions as a bacterial gene silencer

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcription-driven DNA supercoiling and gene expression control

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

In vitro transcription from the Escherichia coli ilvIH promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Effects of nutrition and growth rate on Lrp levels in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Inorganic polyphosphate regulates responses of Escherichia coli to nutritional stringencies, environmental stresses and survival in the stationary phase

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

ppGpp-dependent leuO expression in bacteria under stress.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Inorganic polyphosphate and the induction of rpoS expression

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

LeuO expression in response to starvation for branched-chain amino acids

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

The ilvIH operon of Escherichia coli is positively regulated

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Absence of acetohydroxy acid synthase III in Salmonella typhimurium is due to early termination of translation within the ilvl gene.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

The LysR-like regulator LeuO in Escherichia coli is involved in the translational regulation of rpoS by affecting the expression of the small regulatory DsrA-RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Effects of multicopy LeuO on the expression of the acid-inducible lysine decarboxylase gene in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

DNA supercoiling-dependent transcriptional coupling between the divergently transcribed promoters of the ilvYC operon of Escherichia coli is proportional to promoter strengths and transcript lengths

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

The effects of DNA supercoiling on the expression of operons of the ilv regulon of Escherichia coli suggest a physiological rationale for divergently transcribed operons

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcriptional coupling between the divergent promoters of a prototypic LysR-type regulatory system, the ilvYC operon of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Identification of two initiator elements in the bidirectional promoter of the human dihydrofolate reductase and mismatch repair protein 1 genes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

The bidirectional promoter of the divergently transcribed mouse Surf-1 and Surf-2 genes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

A strong candidate for the breast and ovarian cancer susceptibility gene BRCA1

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

A novel gene encoding a B-box protein within the BRCA1 region at 17q21.1.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Potent stimulation of transcription-coupled DNA supercoiling by sequence-specific DNA-binding proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

The leuO gene product has a latent ability to relieve bgl silencing in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Escherichia coli and Salmonella typhimurium supX genes specify deoxyribonucleic acid topoisomerase I

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6603%2803%2901002-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/S0079-6603(03)01002-X

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

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