(Q35194414)

7 August 2017

title

A protein-induced DNA bend increases the specificity of a prokaryotic enhancer-binding protein (English)

1 reference

7 August 2017

J Dworkin

1

1 reference

7 August 2017

A J Ninfa

series ordinal

2

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7 August 2017

P Model

series ordinal

3

1 reference

7 August 2017

publication date

1 March 1998

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7 August 2017

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7 August 2017

volume

12

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7 August 2017

issue

6

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7 August 2017

page(s)

894-900

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describes a project that uses

7 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC316635/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Transcriptional activation via DNA-looping: visualization of intermediates in the activation pathway of E. coli RNA polymerase x sigma 54 holoenzyme by scanning force microscopy.

13 July 2018

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Distal enhancer regulation by promoter derepression in topologically constrained DNA in vitro

13 July 2018

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13 July 2018

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Mutant forms of the enhancer-binding protein NtrC can activate transcription from solution

13 July 2018

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Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

13 July 2018

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Regulatory noise in prokaryotic promoters: how bacteria learn to respond to novel environmental signals

13 July 2018

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Use of PCR to isolate genes encoding sigma54-dependent activators from diverse bacteria

13 July 2018

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Identification, nucleotide sequence, and characterization of PspF, the transcriptional activator of the Escherichia coli stress-induced psp operon

13 July 2018

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Action at a distance: DNA-looping and initiation of transcription

13 July 2018

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The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains

13 July 2018

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Promoters responsive to DNA bending: a common theme in prokaryotic gene expression

13 July 2018

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Regulated expression in vitro of genes coding for formate hydrogenlyase components of Escherichia coli.

13 July 2018

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Promoter structure, promoter recognition, and transcription activation in prokaryotes.

13 July 2018

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Integration host factor suppresses promiscuous activation of the sigma 54-dependent promoter Pu of Pseudomonas putida

13 July 2018

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Analysis of the proteins andcis-acting elements regulating the stress-induced phage shock protein operon

13 July 2018

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Repression of the Klebsiella aerogenes nac promoter

13 July 2018

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Non-specific DNA binding of genome regulating proteins as a biological control mechanism: I. The lac operon: equilibrium aspects

13 July 2018

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Initiation of transcription at the bacterial glnAp2 promoter by purified E. coli components is facilitated by enhancers.

13 July 2018

1 reference

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Action at a distance along a DNA.

13 July 2018

1 reference

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Upstream operators enhance repression of the lac promoter

13 July 2018

1 reference

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The DNA-binding domain of the transcriptional activator protein NifA resides in its carboxy terminus, recognises the upstream activator sequences of nif promoters and can be separated from the positive control function of NifA.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Gene regulation by proteins acting nearby and at a distance

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Covalent modification of the glnG product, NRI, by the glnL product, NRII, regulates the transcription of the glnALG operon in Escherichia coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Transcription of glnA by purified Escherichia coli components: core RNA polymerase and the products of glnF, glnG, and glnL.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Transcription generates positively and negatively supercoiled domains in the template.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Curved helix segments can uniquely orient the topology of supertwisted DNA.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Function of a bacterial activator protein that binds to transcriptional enhancers

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Stable DNA loops in vivo and in vitro: roles in gene regulation at a distance and in biophysical characterization of DNA.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

DNA-looping and enhancer activity: association between DNA-bound NtrC activator and RNA polymerase at the bacterial glnA promoter

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Role of integration host factor in the regulation of the glnHp2 promoter of Escherichia coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

A bacterial enhancer functions to tether a transcriptional activator near a promoter.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

AraC-DNA looping: Orientation and distance-dependent loop breaking by the cyclic AMP receptor protein

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Prokaryotic transcriptional enhancers and enhancer-binding proteins

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Stress-induced expression of the Escherichia coli phage shock protein operon is dependent on sigma 54 and modulated by positive and negative feedback mechanisms.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Characterization and sequence of the Escherichia coli stress-induced psp operon.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Dissection of IncP conjugative plasmid transfer: definition of the transfer region Tra2 by mobilization of the Tra1 region in trans

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Positive and negative effects of DNA bending on activation of transcription from a distant site

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Role of integration host factor in stimulating transcription from the sigma 54-dependent nifH promoter

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316635

Role of upstream activation sequences and integration host factor in transcriptional activation by the constitutively active prokaryotic enhancer-binding protein PspF

13 July 2018

1 reference

12 December 2020

The general affinity of lac repressor for E. coli DNA: Implications for gene regulation in procaryotes and eucaryotes

1 reference

12 December 2020

Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter

1 reference

12 December 2020

Multiple DNA-protein interactions governing high-precision DNA transactions

1 reference

12 December 2020

Transcriptional activation of the Klebsiella pneumoniae nitrogenase promoter may involve DNA loop formation

1 reference

12 December 2020

1 reference

12 December 2020

Conformational and thermodynamic properties of supercoiled DNA

1 reference

12 December 2020

Identifiers

DOI

10.1101/GAD.12.6.894

1 reference

7 August 2017

1 reference

7 August 2017

1 reference