(Q35195932)

7 August 2017

title

Unusually effective microRNA targeting within repeat-rich coding regions of mammalian mRNAs (English)

1 reference

7 August 2017

1 reference

Norbert Perrimon

4

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Bonnie Berger

6

object named as

Bonnie Berger

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7 August 2017

5

David P Bartel

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7 August 2017

author name string

Michael Schnall-Levin

1

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7 August 2017

Olivia S Rissland

2

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7 August 2017

Wendy K Johnston

3

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7 August 2017

publication date

17 June 2011

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7 August 2017

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7 August 2017

volume

21

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7 August 2017

issue

9

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7 August 2017

page(s)

1395-1403

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miRBase: integrating microRNA annotation and deep-sequencing data

7 August 2017

cites work

1 reference

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Conserved microRNA targeting in Drosophila is as widespread in coding regions as in 3'UTRs

28 July 2018

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MicroRNA-181a modulates gene expression of zinc finger family members by directly targeting their coding regions

28 July 2018

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Mammalian microRNAs: experimental evaluation of novel and previously annotated genes

28 July 2018

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Target mRNA abundance dilutes microRNA and siRNA activity

28 July 2018

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Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

28 July 2018

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Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans

28 July 2018

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Identification of a microRNA signature associated with progression of leukoplakia to oral carcinoma

28 July 2018

1 reference

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CRD-BP protects the coding region of betaTrCP1 mRNA from miR-183-mediated degradation

28 July 2018

1 reference

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Identification of microRNA-181 by genome-wide screening as a critical player in EpCAM-positive hepatic cancer stem cells

28 July 2018

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Biological basis for restriction of microRNA targets to the 3' untranslated region in mammalian mRNAs

28 July 2018

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MicroRNAs: target recognition and regulatory functions

28 July 2018

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Small silencing RNAs: an expanding universe

28 July 2018

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Adaptive evolution in zinc finger transcription factors

28 July 2018

1 reference

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SysZNF: the C2H2 zinc finger gene database

28 July 2018

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Most mammalian mRNAs are conserved targets of microRNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation

28 July 2018

1 reference

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Widespread changes in protein synthesis induced by microRNAs

28 July 2018

1 reference

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The impact of microRNAs on protein output

28 July 2018

1 reference

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MicroRNA-10a binds the 5'UTR of ribosomal protein mRNAs and enhances their translation

28 July 2018

1 reference

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MicroRNA-126 regulates HOXA9 by binding to the homeobox

28 July 2018

1 reference

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Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance

28 July 2018

1 reference

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Eukaryotic transcription factor binding sites--modeling and integrative search methods

28 July 2018

1 reference

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miR-148 targets human DNMT3b protein coding region

28 July 2018

1 reference

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Determinants of targeting by endogenous and exogenous microRNAs and siRNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

MicroRNA targeting specificity in mammals: determinants beyond seed pairing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Isolation of microRNA targets by miRNP immunopurification

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

P bodies and the control of mRNA translation and degradation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

The highways and byways of mRNA decay

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Evolutionary expansion and divergence in the ZNF91 subfamily of primate-specific zinc finger genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

A comprehensive catalog of human KRAB-associated zinc finger genes: insights into the evolutionary history of a large family of transcriptional repressors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Specificity of microRNA target selection in translational repression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

MicroRNAs modulate hematopoietic lineage differentiation

28 July 2018

1 reference

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The retinoblastoma tumour suppressor in development and cancer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

DNA recognition by Cys2His2 zinc finger proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Cloning and characterization of a novel Kruppel-associated box family transcriptional repressor that interacts with the retinoblastoma gene product, RB

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

28 July 2018

The Hallmarks of Cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

STAT3 Activation of miR-21 and miR-181b-1 via PTEN and CYLD Are Part of the Epigenetic Switch Linking Inflammation to Cancer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Mammalian microRNAs predominantly act to decrease target mRNA levels

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

A census of human transcription factors: function, expression and evolution

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Expandable DNA repeats and human disease.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166825

26 September 2018

Identifiers

DOI

10.1101/GR.121210.111

1 reference

7 August 2017

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7 August 2017

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