(Q35196606)

7 August 2017

title

SEED: efficient clustering of next-generation sequences (English)

1 reference

7 August 2017

4

Thomas Girke

1 reference

7 August 2017

Ergude Bao

1

1 reference

7 August 2017

Tao Jiang

series ordinal

2

1 reference

7 August 2017

Isgouhi Kaloshian

series ordinal

3

1 reference

7 August 2017

language of work or name

English

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publication date

2 August 2011

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7 August 2017

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7 August 2017

volume

27

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7 August 2017

issue

18

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7 August 2017

page(s)

2502-2509

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Creative Commons Attribution-NonCommercial 2.5 Generic

7 August 2017

copyright license

start time

1 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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A map of human genome variation from population-scale sequencing

28 July 2018

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The European Nucleotide Archive

28 July 2018

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Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control

28 July 2018

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PEACE: Parallel Environment for Assembly and Clustering of Gene Expression

28 July 2018

1 reference

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The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

28 July 2018

1 reference

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Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing

28 July 2018

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Clusters and superclusters of phased small RNAs in the developing inflorescence of rice

28 July 2018

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EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data

28 July 2018

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The Sequence Alignment/Map format and SAMtools

28 July 2018

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Fast and accurate short read alignment with Burrows-Wheeler transform

28 July 2018

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Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing

28 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

28 July 2018

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28 July 2018

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ZOOM! Zillions of oligos mapped

28 July 2018

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The new paradigm of flow cell sequencing.

28 July 2018

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An overview of the wcd EST clustering tool

28 July 2018

1 reference

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Microbiology in the post-genomic era.

28 July 2018

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

28 July 2018

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

28 July 2018

1 reference

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PatternHunter: faster and more sensitive homology search

28 July 2018

1 reference

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CAP3: A DNA sequence assembly program

28 July 2018

1 reference

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Assemblies: the good, the bad, the ugly.

28 July 2018

1 reference

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Search and clustering orders of magnitude faster than BLAST

26 September 2018

1 reference

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Orchestration of floral initiation by APETALA1.

26 September 2018

1 reference

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Assembly algorithms for next-generation sequencing data

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167058

A fast hybrid short read fragment assembly algorithm

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167058

AGO1-miR173 complex initiates phased siRNA formation in plants

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167058

Mapping short DNA sequencing reads and calling variants using mapping quality scores

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167058

SeqMap: mapping massive amount of oligonucleotides to the genome

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167058

Assembling millions of short DNA sequences using SSAKE.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167058

10.1093/BIOINFORMATICS/BTR447

26 September 2018

Identifiers

DOI

1 reference

journals/bioinformatics/BaoJKG11

7 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

7 August 2017

1 reference