(Q35208522)

7 August 2017

title

Improved resolution of bacteria by high throughput sequence analysis of the rRNA internal transcribed spacer (English)

1 reference

7 August 2017

5

James Borneman

1 reference

7 August 2017

Paul M Ruegger

1

1 reference

7 August 2017

Robin T Clark

series ordinal

2

1 reference

7 August 2017

John R Weger

series ordinal

3

1 reference

7 August 2017

Jonathan Braun

series ordinal

4

1 reference

7 August 2017

publication date

15 July 2014

1 reference

Journal of Microbiological Methods

7 August 2017

published in

1 reference

7 August 2017

volume

105

1 reference

7 August 2017

page(s)

82-87

1 reference

Moving pictures of the human microbiome

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Search and clustering orders of magnitude faster than BLAST

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

QIIME allows analysis of high-throughput community sequencing data

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

PyNAST: a flexible tool for aligning sequences to a template alignment

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Bacterial community variation in human body habitats across space and time

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Community analysis of chronic wound bacteria using 16S rRNA gene-based pyrosequencing: impact of diabetes and antibiotics on chronic wound microbiota

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

Sequence-based differentiation of strains in the Mycobacterium avium complex

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

New primers to amplify the fungal ITS2 region--evaluation by 454-sequencing of artificial and natural communities.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4160368

The 16s/23s ribosomal spacer region as a target for DNA probes to identify eubacteria

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25034229

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Amplification of rDNA loci to detect and type Neisseria meningitidis and other eubacteria

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25034229

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MIMET.2014.07.001

1 reference

7 August 2017

1 reference

7 August 2017

1 reference