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Principles of designing interpretable optogenetic behavior experiments.
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Europe PubMed Central
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4371169
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25787711%20AND%20SRC:MED&resulttype=core&format=json
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3 March 2020
review article
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title
Principles of designing interpretable optogenetic behavior experiments
(English)
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Europe PubMed Central
PMCID
4371169
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3 March 2020
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optogenetics
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Annabelle C Singer
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2
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4371169
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3 March 2020
Annabelle C Singer
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3
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Europe PubMed Central
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4371169
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25787711%20AND%20SRC:MED&resulttype=core&format=json
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3 March 2020
Edward Boyden
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Edward S Boyden
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4371169
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3 March 2020
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Brian D Allen
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4371169
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publication date
18 March 2015
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3 March 2020
published in
Learning and Memory
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4371169
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3 March 2020
volume
22
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4371169
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3 March 2020
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4
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3 March 2020
page(s)
232-238
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4371169
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3 March 2020
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Preferential labeling of inhibitory and excitatory cortical neurons by endogenous tropism of adeno-associated virus and lentivirus vectors.
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Automated light-based mapping of motor cortex by photoactivation of channelrhodopsin-2 transgenic mice
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Improved expression of halorhodopsin for light-induced silencing of neuronal activity
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A novel molecular solution for ultraviolet light detection in Caenorhabditis elegans
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Escape behavior elicited by single, channelrhodopsin-2-evoked spikes in zebrafish somatosensory neurons
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Neurons born in the adult dentate gyrus form functional synapses with target cells
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
A FLEX switch targets Channelrhodopsin-2 to multiple cell types for imaging and long-range circuit mapping
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
High-resolution labeling and functional manipulation of specific neuron types in mouse brain by Cre-activated viral gene expression
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Effects on capacitance by overexpression of membrane proteins.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Targeting and readout strategies for fast optical neural control in vitro and in vivo
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
In vivo light-induced activation of neural circuitry in transgenic mice expressing channelrhodopsin-2.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
retrieved
13 July 2018
Multimodal fast optical interrogation of neural circuitry
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Optical induction of synaptic plasticity using a light-sensitive channel.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
retrieved
13 July 2018
Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Efficient neuronal gene transfer with AAV8 leads to neurotoxic levels of tau or green fluorescent proteins
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Millisecond-timescale, genetically targeted optical control of neural activity
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Lentivirus-based genetic manipulations of cortical neurons and their optical and electrophysiological monitoring in vivo
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Channelrhodopsin-2, a directly light-gated cation-selective membrane channel
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
A gene expression atlas of the central nervous system based on bacterial artificial chromosomes
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Cerebellar cortical inhibition and classical eyeblink conditioning
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
The versatility and universality of calcium signalling
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Retrograde inhibition of presynaptic calcium influx by endogenous cannabinoids at excitatory synapses onto Purkinje cells
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Endogenous cannabinoids mediate retrograde signalling at hippocampal synapses
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Engineering the mouse genome by site-specific recombination
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
retrieved
13 July 2018
Is green fluorescent protein toxic to the living cells?
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Encephalopsin: a novel mammalian extraretinal opsin discretely localized in the brain
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Activity-dependent scaling of quantal amplitude in neocortical neurons
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Pinopsin is a chicken pineal photoreceptive molecule
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Photoactive mitochondria: in vivo transfer of a light-driven proton pump into the inner mitochondrial membrane of Schizosaccharomyces pombe.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Long-term depression in cerebellar Purkinje neurons results from coincidence of nitric oxide and depolarization-induced Ca2+ transients
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
Hyperthermia from interstitial laser irradiation in normal rat brain
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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13 July 2018
ChAT-ChR2-EYFP mice have enhanced motor endurance but show deficits in attention and several additional cognitive domains.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Optogenetics and translational medicine.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Dopaminergic modulation of mitral cells and odor responses in the zebrafish olfactory bulb.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Optogenetic inhibition of Purkinje cell activity reveals cerebellar control of blood pressure during postural alterations in anesthetized rats.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Dynamics of retrieval strategies for remote memories.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Scanless two-photon excitation of channelrhodopsin-2.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
A transgenic mouse line for molecular genetic analysis of excitatory glutamatergic neurons.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
retrieved
26 September 2018
A toolbox for light control of Drosophila behaviors through Channelrhodopsin 2-mediated photoactivation of targeted neurons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Light-induced activation of distinct modulatory neurons triggers appetitive or aversive learning in Drosophila larvae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
retrieved
26 September 2018
Kinetic evaluation of photosensitivity in genetically engineered neurons expressing green algae light-gated channels.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Adaptation to synaptic inactivity in hippocampal neurons
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Targeted gene expression in dopamine and serotonin neurons of the mouse brain
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Light stimulus change evokes an activity response in the rat.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Activity-dependent homeostatic specification of transmitter expression in embryonic neurons
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Differential transgene expression in brain cells in vivo and in vitro from AAV-2 vectors with small transcriptional control units.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Association between brain temperature and dentate field potentials in exploring and swimming rats.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371169
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26 September 2018
Targeting Cre recombinase to specific neuron populations with bacterial artificial chromosome constructs
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25787711
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Hindbrain V2a neurons in the excitation of spinal locomotor circuits during zebrafish swimming
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25787711
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25787711
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Bypass of lethality with mosaic mice generated by Cre– loxP -mediated recombination
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25787711
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/LM.038026.114
1 reference
stated in
Europe PubMed Central
PMCID
4371169
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25787711%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 March 2020
PMCID
4371169
1 reference
stated in
Europe PubMed Central
PMCID
4371169
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25787711%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 March 2020
PubMed ID
25787711
1 reference
stated in
Europe PubMed Central
PMCID
4371169
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25787711%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 March 2020
ResearchGate publication ID
273782736
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