(Q35212018)

7 August 2017

title

RNA shotgun metagenomic sequencing of northern California (USA) mosquitoes uncovers viruses, bacteria, and fungi (English)

1 reference

7 August 2017

0 references

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3

Shannon N Bennett

1 reference

7 August 2017

James Angus Chandler

1

1 reference

7 August 2017

Rachel M Liu

series ordinal

2

1 reference

7 August 2017

language of work or name

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24 March 2015

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Frontiers in Microbiology

7 August 2017

published in

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7 August 2017

volume

6

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7 August 2017

page(s)

185

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Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

7 August 2017

cites work

1 reference

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Native microbiome impedes vertical transmission of Wolbachia in Anopheles mosquitoes

13 July 2018

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Metagenomic shotgun sequencing of a Bunyavirus in wild-caught Aedes aegypti from Thailand informs the evolutionary and genomic history of the Phleboviruses

13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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The effect of primer choice and short read sequences on the outcome of 16S rRNA gene based diversity studies

13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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Diversity and function of bacterial microbiota in the mosquito holobiont

13 July 2018

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The emerging world of the fungal microbiome

13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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A new virus from the plant pathogenic oomycete Phytophthora infestans with an 8 kb dsRNA genome: the sixth member of a proposed new virus genus

13 July 2018

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Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

13 July 2018

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SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models

13 July 2018

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13 July 2018

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Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

13 July 2018

1 reference

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Fighting malaria with engineered symbiotic bacteria from vector mosquitoes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Functional diversity within the simple gut microbiota of the honey bee.

13 July 2018

1 reference

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Gut-associated microbes of Drosophila melanogaster

13 July 2018

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IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

13 July 2018

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Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life

13 July 2018

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Mosquito vectors of dog heartworm in the United States: vector status and factors influencing transmission efficiency

13 July 2018

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13 July 2018

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Native microbiota shape insect vector competence for human pathogens.

13 July 2018

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Bacterial communities of diverse Drosophila species: ecological context of a host-microbe model system

13 July 2018

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Discovery of DNA viruses in wild-caught mosquitoes using small RNA high throughput sequencing.

13 July 2018

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"Bird biting" mosquitoes and human disease: a review of the role of Culex pipiens complex mosquitoes in epidemiology

13 July 2018

1 reference

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The wMel Wolbachia strain blocks dengue and invades caged Aedes aegypti populations

13 July 2018

1 reference

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Gouleako virus isolated from West African mosquitoes constitutes a proposed novel genus in the family Bunyaviridae

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Microbiome influences on insect host vector competence

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Temporal analysis of the honey bee microbiome reveals four novel viruses and seasonal prevalence of known viruses, Nosema, and Crithidia

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

RNA splicing in a new rhabdovirus from Culex mosquitoes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Malaria and other vector-borne infection surveillance in the U.S. Department of Defense Armed Forces Health Surveillance Center-Global Emerging Infections Surveillance program: review of 2009 accomplishments.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Arbovirus detection in insect vectors by rapid, high-throughput pyrosequencing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

The native Wolbachia endosymbionts of Drosophila melanogaster and Culex quinquefasciatus increase host resistance to West Nile virus infection

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Plant-feeding insects harbor double-stranded RNA viruses encoding a novel proline-alanine rich protein and a polymerase distantly related to that of fungal viruses

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

A human gut microbial gene catalogue established by metagenomic sequencing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Studies on Rickettsia-Like Micro-Organisms in Insects

13 July 2018

1 reference

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Moussa virus: A new member of the Rhabdoviridae family isolated from Culex decens mosquitoes in Côte d’Ivoire

13 July 2018

1 reference

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13 July 2018

1 reference

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Molecular characterization of the plant virus genus Ourmiavirus and evidence of inter-kingdom reassortment of viral genome segments as its possible route of origin

13 July 2018

1 reference

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The rhabdoviruses: biodiversity, phylogenetics, and evolution

13 July 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

How many species are infected with Wolbachia?--A statistical analysis of current data

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Culture clash: challenging the dogma of microbial diversity

13 July 2018

1 reference

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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

13 July 2018

1 reference

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

13 July 2018

1 reference

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New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Phylogenetic relationships among rhabdoviruses inferred using the L polymerase gene.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

Entomopathogenic fungi for mosquito control: a review

13 July 2018

1 reference

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Skin diseases associated with Malassezia species

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4371751

The challenge of emerging and re-emerging infectious diseases

13 July 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

13 July 2018

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MrBayes 3: Bayesian phylogenetic inference under mixed models

13 July 2018

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Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products

13 July 2018

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Phylogenetic identification and in situ detection of individual microbial cells without cultivation

13 July 2018

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Basic local alignment search tool

13 July 2018

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Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing

13 July 2018

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Sigma viruses from three species of Drosophila form a major new clade in the rhabdovirus phylogeny.

13 July 2018

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An initial survey for Wolbachia (Rickettsiales: Rickettsiaceae) infections in selected California mosquitoes (Diptera: Culicidae).

26 September 2018

1 reference

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26 September 2018

Identifiers

DOI

10.3389/FMICB.2015.00185

1 reference

7 August 2017

1 reference

7 August 2017

1 reference