(Q35214651)

7 August 2017

title

Exploring atomistic details of pH-dependent peptide folding (English)

1 reference

7 August 2017

3

Charles L Brooks

1 reference

7 August 2017

Jana Khandogin

1

1 reference

7 August 2017

Jianhan Chen

series ordinal

2

1 reference

7 August 2017

language of work or name

English

0 references

publication date

20 November 2006

1 reference

Proceedings of the National Academy of Sciences of the United States of America

7 August 2017

published in

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7 August 2017

volume

103

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7 August 2017

issue

49

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7 August 2017

page(s)

18546-18550

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Toward the accurate first-principles prediction of ionization equilibria in proteins.

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Balancing solvation and intramolecular interactions: toward a consistent generalized Born force field

13 July 2018

1 reference

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Constant pH molecular dynamics with proton tautomerism

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Dynamics of water in biological recognition

13 July 2018

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Comparison between UV Raman and circular dichroism detection of short alpha helices in bombolitin III.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

A direct comparison of helix propensity in proteins and peptides

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Coupling between folding and ionization equilibria: effects of pH on the conformational preferences of polypeptides.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

A salt bridge stabilizes the helix formed by isolated C-peptide of RNase A

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Nature of the charged-group effect on the stability of the C-peptide helix

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Structure of phosphate-free ribonuclease A refined at 1.26 .ANG

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Generalized born model with a simple smoothing function.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Aromatic side-chain interactions in proteins. I. Main structural features

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

1H NMR studies of the solution conformations of an analogue of the C-peptide of ribonuclease A.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1693699

Replica-exchange molecular dynamics method for protein folding

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0605216103

Conformational role of His-12 in C-peptide of ribonuclease A

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0605216103

GROMACS 3.0: a package for molecular simulation and trajectory analysis

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0605216103

Aromatic rings act as hydrogen bond acceptors

21 January 2018

1 reference

12 December 2020

Constant-pH molecular dynamics using continuous titration coordinates

1 reference

12 December 2020

Side-chain interactions in the C-peptide helix: Phe 8 ... His 12+

1 reference

12 December 2020

The Glu 2- ... Arg 10+ side-chain interaction in the C-peptide helix of ribonuclease A

1 reference

12 December 2020

Theoretical CD studies of polypeptide helices: examination of important electronic and geometric factors

1 reference

12 December 2020

Helicity, circular dichroism and molecular dynamics of proteins

1 reference

12 December 2020

α-Helix formation by peptides of defined sequence

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0605216103

1 reference

7 August 2017

0 references

1 reference

7 August 2017

1 reference