(Q35234492)

7 August 2017

title

Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy (English)

1 reference

cryogenic electron microscopy

7 August 2017

main subject

0 references

3

Joachim Frank

0 references

Mikel Valle

series ordinal

2

object named as

Mikel Valle

1 reference

7 August 2017

Florence Tama

1

0 references

author name string

Charles L Brooks

series ordinal

4

1 reference

7 August 2017

language of work or name

English

0 references

publication date

23 July 2003

1 reference

Proceedings of the National Academy of Sciences of the United States of America

7 August 2017

published in

1 reference

7 August 2017

volume

100

1 reference

7 August 2017

issue

16

1 reference

7 August 2017

page(s)

9319-9323

1 reference

Exploring global distortions of biological macromolecules and assemblies from low-resolution structural information and elastic network theory.

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

How to describe protein motion without amino acid sequence and atomic coordinates.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

The mechanism and pathway of pH induced swelling in cowpea chlorotic mottle virus

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Ribosome structure and the mechanism of translation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

The polypeptide tunnel system in the ribosome and its gating in erythromycin resistance mutants of L4 and L22.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Conformational change of proteins arising from normal mode calculations

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Crystal structure of the ribosome at 5.5 A resolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Crystal structure of an initiation factor bound to the 30S ribosomal subunit

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Structure of the 30S ribosomal subunit

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

A ratchet-like inter-subunit reorganization of the ribosome during translocation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Solution structure of the E. coli 70S ribosome at 11.5 A resolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

13 July 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Major rearrangements in the 70S ribosomal 3D structure caused by a conformational switch in 16S ribosomal RNA

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

X-ray crystal structures of 70S ribosome functional complexes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Vibrational dynamics of transfer RNAs: comparison of the free and synthetase-bound forms

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Molecular movement inside the translational engine

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

VMD: visual molecular dynamics

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

A model of the translational apparatus based on a three-dimensional reconstruction of the Escherichia coli ribosome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Harmonic dynamics of proteins: normal modes and fluctuations in bovine pancreatic trypsin inhibitor

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Dynamics of a small globular protein in terms of low-frequency vibrational modes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Building-block approach for determining low-frequency normal modes of macromolecules.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170916

Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1632476100

Direct Visualization of A-, P-, and E-Site Transfer RNAs in the Escherichia coli Ribosome

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1632476100

Effect of buffer conditions on the position of tRNA on the 70 S ribosome as visualized by cryoelectron microscopy

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12878726

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1632476100

1 reference

7 August 2017

0 references

1 reference

7 August 2017

1 reference