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Impact of small repeat sequences on bacterial genome evolution.
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Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
title
Impact of small repeat sequences on bacterial genome evolution
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
main subject
bacterial evolution
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inferred from title
author
Nicholas Delihas
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
author name string
Nicholas Delihas
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
21803768
retrieved
7 August 2017
publication date
29 July 2011
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
published in
Genome Biology and Evolution
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stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
volume
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
page(s)
959-973
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
copyright license
Creative Commons Attribution-NonCommercial 3.0 Unported
start time
3 October 2016
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April 2022 Public Data File from Crossref
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copyrighted
0 references
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Interspersed DNA repeats bcr1-bcr18 of Bacillus cereus group bacteria form three distinct groups with different evolutionary and functional patterns.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
A giant family of short palindromic sequences in Stenotrophomonas maltophilia.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Transposition of the Tourist-MITE mPing in yeast: an assay that retains key features of catalysis by the class 2 PIF/Harbinger superfamily
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Self versus non-self discrimination during CRISPR RNA-directed immunity.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Is evolution Darwinian or/and Lamarckian?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Tuned for transposition: molecular determinants underlying the hyperactivity of a Stowaway MITE.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Integron mobilization unit as a source of mobility of antibiotic resistance genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Interaction between bacteriophage DMS3 and host CRISPR region inhibits group behaviors of Pseudomonas aeruginosa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Exploring the evolution of the Bacillus cereus group repeat element bcr1 by comparative genome analysis of closely related strains
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Cutting edge: natural DNA repetitive extragenic sequences from gram-negative pathogens strongly stimulate TLR9.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Insertion sequences in prokaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
The Bacillus cereus group: novel aspects of population structure and genome dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Bacterial repetitive extragenic palindromic sequences are DNA targets for Insertion Sequence elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Enterobacterial repetitive intergenic consensus (ERIC) sequences in Escherichia coli: Evolution and implications for ERIC-PCR.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Riboswitches as versatile gene control elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
The plant MITE mPing is mobilized in anther culture.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
The abundant class of nemis repeats provides RNA substrates for ribonuclease III in Neisseriae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Selfish DNA in Protein-Coding Genes of Rickettsia
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Repeated extragenic sequences in prokaryotic genomes: a proposal for the origin and dynamics of the RUP element in Streptococcus pneumoniae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Structural and functional diversity among bacterial interspersed mosaic elements (BIMEs).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Integration host factor binds to a unique class of complex repetitive extragenic DNA sequences in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
A family of dispersed repetitive extragenic palindromic DNA sequences in E. coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
A family of small repeated elements with some transposon-like properties in the genome of Neisseria gonorrhoeae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
26 September 2018
Non-autonomous transposable elements associated with inactivation of microcystin gene clusters in strains of the genus Anabaena isolated from the Baltic Sea
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3184786
retrieved
15 November 2018
Whole-genome organization and functional properties of miniature DNA insertion sequences conserved in pathogenic Neisseriae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21803768
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Repetitive extragenic palindromic sequences in the Pseudomonas syringae pv. tomato DC3000 genome: extragenic signals for genome reannotation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21803768
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Nezha, a novel active miniature inverted-repeat transposable element in cyanobacteria
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21803768
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Transposon-like Correia elements: structure, distribution and genetic exchange between pathogenic Neisseria sp
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21803768
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
In vivo cleavage of Escherichia coli BIME-2 repeats by DNA gyrase: genetic characterization of the target and identification of the cut site
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21803768
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/GBE/EVR077
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
PMC publication ID
3184786
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
PubMed publication ID
21803768
1 reference
stated in
Europe PubMed Central
PMC publication ID
3184786
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21803768%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 February 2020
ResearchGate publication ID
51535047
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