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Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads.
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scholarly article
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
title
Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
main subject
RNA sequencing
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RNA-Seq
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author
Ernest Turro
series ordinal
1
1 reference
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
Angela Goncalves
series ordinal
3
1 reference
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
Lachlan Coin
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4
1 reference
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
Sylvia Richardson
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5
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
Alexandra M. Lewin
series ordinal
6
1 reference
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
author name string
Shu-Yi Su
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
language of work or name
English
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publication date
10 February 2011
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Europe PubMed Central
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3188795
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
published in
Genome Biology
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
volume
12
1 reference
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
issue
2
1 reference
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Europe PubMed Central
PMCID
3188795
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
page(s)
R13
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Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
exact match
https://scigraph.springernature.com/pub.10.1186/gb-2011-12-2-r13
0 references
cites work
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PubMed Central
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Differential expression analysis for sequence count data
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27 July 2018
Sex-specific parent-of-origin allelic expression in the mouse brain
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High-resolution analysis of parent-of-origin allelic expression in the mouse brain
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27 July 2018
Modeling non-uniformity in short-read rates in RNA-Seq data
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27 July 2018
Inferring combined CNV/SNP haplotypes from genotype data
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27 July 2018
Biases in Illumina transcriptome sequencing caused by random hexamer priming
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27 July 2018
Transcriptome genetics using second generation sequencing in a Caucasian population
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27 July 2018
Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3188795
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27 July 2018
RNA-Seq gene expression estimation with read mapping uncertainty
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27 July 2018
Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
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27 July 2018
The Sequence Alignment/Map format and SAMtools
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27 July 2018
TopHat: discovering splice junctions with RNA-Seq
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Statistical inferences for isoform expression in RNA-Seq
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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
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26 September 2018
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26 September 2018
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1 reference
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reference URL
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retrieved
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inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/GB-2011-12-2-R13
1 reference
stated in
Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
Dimensions Publication ID
1029215658
0 references
PMCID
3188795
1 reference
stated in
Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
PubMed ID
21310039
1 reference
stated in
Europe PubMed Central
PMCID
3188795
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21310039%20AND%20SRC:MED&resulttype=core&format=json
retrieved
22 January 2020
ResearchGate publication ID
49825609
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