(Q35311930)

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Full-length Dengue virus RNA-dependent RNA polymerase-RNA/DNA complexes: stoichiometries, intrinsic affinities, cooperativities, base, and conformational specificities.

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scholarly article

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6 February 2020

Full-length Dengue virus RNA-dependent RNA polymerase-RNA/DNA complexes: stoichiometries, intrinsic affinities, cooperativities, base, and conformational specificities (English)

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6 February 2020

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structural biology

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dengue virus protein NS5

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based on heuristic

inferred from abstract

Michal R Szymanski

1

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6 February 2020

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Maria J Jezewska

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6 February 2020

Paul J Bujalowski

3

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6 February 2020

Cecile Bussetta

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6 February 2020

Mengyi Ye

5

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6 February 2020

Kyung H Choi

6

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6 February 2020

Wlodzimierz Bujalowski

7

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6 February 2020

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2 July 2011

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6 February 2020

Journal of Biological Chemistry

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6 February 2020

286

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6 February 2020

38

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6 February 2020

33095-33108

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6 February 2020

Characterization of the elongation complex of dengue virus RNA polymerase: assembly, kinetics of nucleotide incorporation, and fidelity

1 reference

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Crystal Structure of the Dengue Virus Methyltransferase Bound to a 5′-Capped Octameric RNA

1 reference

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Interactions of the Escherichia coli primosomal PriB protein with the single-stranded DNA. Stoichiometries, intrinsic affinities, cooperativities, and base specificities.

1 reference

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Interactions of the Escherichia coli DnaB-DnaC protein complex with nucleotide cofactors. 1. Allosteric conformational transitions of the complex.

1 reference

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Multiple global conformational states of the hexameric RepA helicase of plasmid RSF1010 with different ssDNA-binding capabilities are induced by different numbers of bound nucleotides. Analytical ultracentrifugation and dynamic light scattering stud

1 reference

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Interactions of the DNA polymerase X from African swine fever virus with gapped DNA substrates. Quantitative analysis of functional structures of the formed complexes

1 reference

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Interactions of the DNA polymerase X of African swine fever virus with double-stranded DNA. Functional structure of the complex

1 reference

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Crystal Structure of the Dengue Virus RNA-Dependent RNA Polymerase Catalytic Domain at 1.85-Angstrom Resolution

1 reference

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Comparative mechanistic studies of de novo RNA synthesis by flavivirus RNA-dependent RNA polymerases.

1 reference

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Thermodynamic and kinetic methods of analyses of protein-nucleic acid interactions. From simpler to more complex systems

1 reference

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A comparison of viral RNA-dependent RNA polymerases

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DNA polymerase X from African swine fever virus: quantitative analysis of the enzyme-ssDNA interactions and the functional structure of the complex.

1 reference

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12 July 2018

DNA polymerase fidelity: kinetics, structure, and checkpoints

1 reference

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12 July 2018

Interactions of the RepA helicase hexamer of plasmid RSF1010 with the ssDNA. Quantitative analysis of stoichiometries, intrinsic affinities, cooperativities, and heterogeneity of the total ssDNA-binding site

1 reference

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Tertiary Conformation of the Template-Primer and Gapped DNA Substrates in Complexes with Rat Polymerase β. Fluorescence Energy Transfer Studies Using the Multiple Donor−Acceptor Approach

1 reference

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De Novo Synthesis of Negative-Strand RNA by Dengue Virus RNA-Dependent RNA Polymerase In Vitro: Nucleotide, Primer, and Template Parameters

1 reference

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An RNA cap (nucleoside-2'-O-)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization

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Dengue: an update

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De novo synthesis of RNA by the dengue virus RNA-dependent RNA polymerase exhibits temperature dependence at the initiation but not elongation phase

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Escherichia coli replicative helicase PriA protein-single-stranded DNA complex. Stoichiometries, free energy of binding, and cooperativities

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De novo initiation of RNA synthesis by the RNA-dependent RNA polymerase (NS5B) of hepatitis C virus

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Spectroscopic Determination of Tryptophan and Tyrosine in Proteins*

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1 reference

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1 reference

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Multistep sequential mechanism of Escherichia coli helicase PriA protein-ssDNA interactions. Kinetics and energetics of the active ssDNA-searching site of the enzyme

1 reference

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Global conformation of the Escherichia coli replication factor DnaC protein in absence and presence of nucleotide cofactors

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https://pubmed.ncbi.nlm.nih.gov/21725087

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A general method of analysis of ligand binding to competing macromolecules using the spectroscopic signal originating from a reference macromolecule. Application to Escherichia coli replicative helicase DnaB protein nucleic acid interactions

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Identifiers

10.1074/JBC.M111.255034

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21725087%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference

Europe PubMed Central

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6 February 2020

1 reference

Europe PubMed Central

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6 February 2020

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