(Q35324738)

7 August 2017

title

Enhanced Lipid Diffusion and Mixing in Accelerated Molecular Dynamics (English)

1 reference

7 August 2017

4

J Andrew McCammon

1 reference

7 August 2017

Yi Wang

1

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7 August 2017

Phineus R L Markwick

series ordinal

2

1 reference

7 August 2017

César Augusto F de Oliveira

series ordinal

3

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7 August 2017

language of work or name

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24 August 2011

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Journal of Chemical Theory and Computation

7 August 2017

published in

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7 August 2017

volume

7

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7 August 2017

issue

10

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7 August 2017

page(s)

3199-3207

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Implementation of Accelerated Molecular Dynamics in NAMD

7 August 2017

cites work

1 reference

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Lipid bilayers, NMR relaxation, and computer simulations

12 July 2018

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12 July 2018

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12 July 2018

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Combined Monte Carlo and molecular dynamics simulation of fully hydrated dioleyl and palmitoyl-oleyl phosphatidylcholine lipid bilayers

12 July 2018

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Structure of dipalmitoylphosphatidylcholine/cholesterol bilayer at low and high cholesterol concentrations: molecular dynamics simulation

12 July 2018

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Monte Carlo simulation of two-component bilayers: DMPC/DSPC mixtures

12 July 2018

1 reference

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Fluid phase structure of EPC and DMPC bilayers

12 July 2018

1 reference

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VMD: visual molecular dynamics

12 July 2018

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Nonideal mixing of phosphatidylserine and phosphatidylcholine in the fluid lamellar phase

12 July 2018

1 reference

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A calorimetry and deuterium NMR study of mixed model membranes of 1-palmitoyl-2-oleylphosphatidylcholine and saturated phosphatidylcholines

12 July 2018

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Extracting Realistic Kinetics of Rare Activated Processes from Accelerated Molecular Dynamics Using Kramers' Theory.

12 July 2018

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Enhanced conformational space sampling improves the prediction of chemical shifts in proteins

26 September 2018

1 reference

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Estimating kinetic rates from accelerated molecular dynamics simulations: alanine dipeptide in explicit solvent as a case study

26 September 2018

1 reference

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Sampling of slow diffusive conformational transitions with accelerated molecular dynamics

26 September 2018

1 reference

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Molecular dynamics simulations of bilayers containing mixtures of sphingomyelin with cholesterol and phosphatidylcholine with cholesterol.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3191728

Insight into the role of hydration on protein dynamics.

26 September 2018

1 reference

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Phosphorylation effects on cis/trans isomerization and the backbone conformation of serine-proline motifs: accelerated molecular dynamics analysis

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3191728

Accelerated molecular dynamics: a promising and efficient simulation method for biomolecules

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3191728

Lateral Diffusion in Lipid Membranes through Collective Flows

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3191728

Atomistic simulation of hydrophobic matching effects on lipid composition near a helical peptide embedded in mixed-lipid bilayers

8 December 2018

1 reference

12 December 2020

An ab Initio Study on the Torsional Surface of Alkanes and Its Effect on Molecular Simulations of Alkanes and a DPPC Bilayer

1 reference

12 December 2020

Molecular dynamics simulation study of correlated motions in phospholipid bilayer membranes

1 reference

12 December 2020

Structure of fully hydrated fluid phase lipid bilayers with monounsaturated chains

1 reference

12 December 2020

Atomistic simulations of mixed-lipid bilayers in gel and fluid phases

1 reference

12 December 2020

Exploring multiple timescale motions in protein GB3 using accelerated molecular dynamics and NMR spectroscopy

1 reference

12 December 2020

A statistical analysis of the precision of reweighting-based simulations

1 reference

12 December 2020

Multiscale Coarse-Graining of Mixed Phospholipid/Cholesterol Bilayers

1 reference

12 December 2020

Water’s Contribution to the Energetic Roughness from Peptide Dynamics

1 reference

12 December 2020

Molecular dynamics investigation of dynamical properties of phosphatidylethanolamine lipid bilayers

1 reference

12 December 2020

Identifiers

DOI

10.1021/CT200430C

1 reference

7 August 2017

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7 August 2017

1 reference