(Q35443883)

8 August 2017

DoRiNA 2.0--upgrading the doRiNA database of RNA interactions in post-transcriptional regulation (English)

1 reference

8 August 2017

0 references

5

1 reference

8 August 2017

4

Nikolaus Rajewsky

0 references

Altuna Akalin

object named as

Altuna Akalin

6

0 references

Kai Blin

object named as

Kai Blin

1

0 references

author name string

Christoph Dieterich

2

1 reference

PubMed ID

25416797

8 August 2017

Ricardo Wurmus

3

1 reference

PubMed ID

25416797

8 August 2017

language of work or name

English

0 references

publication date

21 November 2014

1 reference

8 August 2017

Nucleic Acids Research

1 reference

8 August 2017

43

1 reference

8 August 2017

Database issue

1 reference

8 August 2017

D160-7

1 reference

Creative Commons Attribution-NonCommercial 4.0 International

8 August 2017

start time

9 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Unambiguous identification of miRNA:target site interactions by different types of ligation reactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

RBPmap: a web server for mapping binding sites of RNA-binding proteins

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Rbfox2 controls autoregulation in RNA-binding protein networks.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

The UCSC Genome Browser database: 2014 update

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

catRAPID omics: a web server for large-scale prediction of protein-RNA interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

A compendium of RNA-binding motifs for decoding gene regulation.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Molecular biology. A circuitous route to noncoding RNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Genome-wide analysis reveals SR protein cooperation and competition in regulated splicing.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Natural RNA circles function as efficient microRNA sponges

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Computational biology of RNA interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Pybedtools: a flexible Python library for manipulating genomic datasets and annotations

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

HITS-CLIP: panoramic views of protein-RNA regulation in living cells

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Most mammalian mRNAs are conserved targets of microRNAs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

Circular RNAs are a large class of animal RNAs with regulatory potency

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

NCBI GEO: archive for functional genomics data sets--update

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

doRiNA: a database of RNA interactions in post-transcriptional regulation

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

AURA: Atlas of UTR Regulatory Activity

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

BEDTools: a flexible suite of utilities for comparing genomic features

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383974

A Genome-Wide Map of Conserved MicroRNA Targets in C. elegans

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25416797

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKU1180

1 reference

8 August 2017

journals/nar/BlinDWRLA15

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

8 August 2017

1 reference

PubMed ID

25416797