(Q35484058)

8 August 2017

title

Next-generation sequencing of Coccidioides immitis isolated during cluster investigation (English)

1 reference

James S Beckstrom-Sternberg

8 August 2017

1 reference

10

object named as

James S Beckstrom-Sternberg

1 reference

Stephen M Beckstrom-Sternberg

8 August 2017

5

object named as

Stephen M Beckstrom-Sternberg

1 reference

8 August 2017

1

David M Engelthaler

1 reference

8 August 2017

14

Paul Keim

1 reference

8 August 2017

17

S Arunmozhi Balajee

1 reference

8 August 2017

Tom Chiller

2

1 reference

8 August 2017

James A Schupp

3

1 reference

8 August 2017

Joshua Colvin

4

1 reference

8 August 2017

Elizabeth M Driebe

6

1 reference

8 August 2017

Tracy Moses

7

1 reference

8 August 2017

Waibhav Tembe

8

1 reference

8 August 2017

Shripad Sinari

9

1 reference

8 August 2017

Alexis Christoforides

11

1 reference

8 August 2017

John V Pearson

12

1 reference

8 August 2017

John Carpten

13

1 reference

8 August 2017

Ashley Peterson

15

1 reference

8 August 2017

Dawn Terashita

16

1 reference

8 August 2017

publication date

1 February 2011

1 reference

Emerging Infectious Diseases

8 August 2017

published in

1 reference

8 August 2017

volume

17

1 reference

8 August 2017

issue

2

1 reference

8 August 2017

page(s)

227-232

1 reference

Coccidioides fungemia in six patients, with a review of the literature

8 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Evolution of MRSA during hospital transmission and intercontinental spread

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

High throughput sequencing and proteomics to identify immunogenic proteins of a new pathogen: the dirty genome approach

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

BFAST: an alignment tool for large scale genome resequencing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Near full-length genome analysis of low prevalent human immunodeficiency virus type 1 subclade F1 in São Paulo, Brazil

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

The Sequence Alignment/Map format and SAMtools

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Phylogenetic understanding of clonal populations in an era of whole genome sequencing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Detection of hepatitis E virus in wild boars of rural and urban regions in Germany and whole genome characterization of an endemic strain

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

CloudBurst: highly sensitive read mapping with MapReduce

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Identification of genetic variants using bar-coded multiplexed sequencing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Short read fragment assembly of bacterial genomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Versatile and open software for comparing large genomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Biogeographic range expansion into South America by Coccidioides immitis mirrors New World patterns of human migration

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

The evolutionary biology and population genetics underlying fungal strain typing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Molecular markers reveal cryptic sex in the human pathogen Coccidioides immitis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Searching for SNPs with cloud computing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Genetic diversity among clinical Coccidioides spp. isolates in Arizona

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Coccidioidomycosis in patients who have undergone transplantation

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

Highly pathogenic H5N1 influenza virus infection in migratory birds

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3204756

26 September 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/21291593

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3201/EID1702.100620

1 reference

8 August 2017

1 reference

8 August 2017

1 reference