(Q35488212)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

title

A trans-dominant form of Gag restricts Ty1 retrotransposition and mediates copy number control (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

Erratum for Saha et al., A trans-Dominant Form of Gag Restricts Ty1 Retrotransposition and Mediates Copy Number Control.

28 February 2020

corrigendum / erratum

1 reference

12 July 2019

http://api.crossref.org/works?select=update-to&filter=doi:10.1128/JVI.00418-16

author

W Gilbert

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

author name string

Agniva Saha

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Jessica A Mitchell

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Yuri Nishida

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Jonathan E Hildreth

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Joshua A Ariberre

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

David J Garfinkel

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

language of work or name

English

0 references

publication date

21 January 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

volume

89

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

page(s)

3922-3938

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

28 February 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4403431/fullTextXML

inferred from PubMed Central ID database lookup

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12 July 2018

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Host co-factors of the retrovirus-like transposon Ty1.

12 July 2018

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RNA degradation in Saccharomyces cerevisae

12 July 2018

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12 July 2018

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Tye7 regulates yeast Ty1 retrotransposon sense and antisense transcription in response to adenylic nucleotides stress.

12 July 2018

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Compatibility with killer explains the rise of RNAi-deficient fungi

12 July 2018

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12 July 2018

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Ordered assembly of murine leukemia virus capsid protein on lipid nanotubes directs specific binding by the restriction factor, Fv1

12 July 2018

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T-body formation precedes virus-like particle maturation in S. cerevisiae

12 July 2018

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The TY3 Gag3 spacer controls intracellular condensation and uncoating

12 July 2018

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12 July 2018

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BUD22 affects Ty1 retrotransposition and ribosome biogenesis in Saccharomyces cerevisiae

12 July 2018

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5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition

12 July 2018

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P-body components are required for Ty1 retrotransposition during assembly of retrotransposition-competent virus-like particles

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome

12 July 2018

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12 July 2018

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12 July 2018

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Remodeling yeast gene transcription by activating the Ty1 long terminal repeat retrotransposon under severe adenine deficiency

12 July 2018

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12 July 2018

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A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae

12 July 2018

1 reference

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Chromatin-associated genes protect the yeast genome from Ty1 insertional mutagenesis

12 July 2018

1 reference

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Ty3 nucleocapsid controls localization of particle assembly

12 July 2018

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12 July 2018

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Host factors that control long terminal repeat retrotransposons in Saccharomyces cerevisiae: implications for regulation of mammalian retroviruses

12 July 2018

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The transdominant endogenous retrovirus enJS56A1 associates with and blocks intracellular trafficking of Jaagsiekte sheep retrovirus Gag

12 July 2018

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Genome evolution mediated by Ty elements in Saccharomyces

12 July 2018

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Ty1 copy number dynamics in Saccharomyces

12 July 2018

1 reference

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5'-untranslated regions with multiple upstream AUG codons can support low-level translation via leaky scanning and reinitiation

12 July 2018

1 reference

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Post-transcriptional Cosuppression of Ty1 Retrotransposition

12 July 2018

1 reference

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Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae

12 July 2018

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A question of size: the eukaryotic proteome and the problems in defining it.

12 July 2018

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A nucleocapsid functionality contained within the amino terminus of the Ty1 protease that is distinct and separable from proteolytic activity

12 July 2018

1 reference

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Ty1 proteolytic cleavage sites are required for transposition: all sites are not created equal

12 July 2018

1 reference

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Inhibition of TATA-binding protein function by SAGA subunits Spt3 and Spt8 at Gcn4-activated promoters

12 July 2018

1 reference

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New lines of host defense: inhibition of Ty1 retrotransposition by Fus3p and NER/TFIIH.

12 July 2018

1 reference

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Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications

12 July 2018

1 reference

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Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Cloning of a new murine endogenous retrovirus, MuERV-L, with strong similarity to the human HERV-L element and with a gag coding sequence closely related to the Fv1 restriction gene

12 July 2018

1 reference

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Structural determinants within the subunit protein of Ty1 virus-like particles

12 July 2018

1 reference

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Positional cloning of the mouse retrovirus restriction gene Fv1.

12 July 2018

1 reference

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Vectors for the inducible overexpression of glutathione S-transferase fusion proteins in yeast

12 July 2018

1 reference

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In-frame linker insertion mutagenesis of yeast transposon Ty1: mutations, transposition and dominance

12 July 2018

1 reference

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In-frame linker insertion mutagenesis of yeast transposon Ty1: phenotypic analysis.

12 July 2018

1 reference

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Heterogeneous functional Ty1 elements are abundant in the Saccharomyces cerevisiae genome.

12 July 2018

1 reference

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Post-transcriptional regulation of transposition by Ty retrotransposons of Saccharomyces cerevisiae

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Efficient Homologous Recombination of Ty1 Element cDNA When Integration Is Blocked

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

RNA from the yeast transposable element Ty1 has both ends in the direct repeats, a structure similar to retrovirus RNA

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Three genes are required for trans-activation of Ty transcription in yeast

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

The functions and relationships of Ty-VLP proteins in yeast reflect those of mammalian retroviral proteins.

12 July 2018

1 reference

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The Saccharomyces cerevisiae genome contains functional and nonfunctional copies of transposon Ty1.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Functional organization of the retrotransposon Ty from Saccharomyces cerevisiae: Ty protease is required for transposition

12 July 2018

1 reference

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Ty element transposition: reverse transcriptase and virus-like particles

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Single-step selection for Ty1 element retrotransposition

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Proteolytic processing of pol-TYB proteins from the yeast retrotransposon Ty1

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Construction of a GAL1-regulated yeast cDNA expression library and its application to the identification of genes whose overexpression causes lethality in yeast

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Involvement of cDNA in homologous recombination between Ty elements in Saccharomyces cerevisiae

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

The population biology and evolutionary significance of Ty elements in Saccharomyces cerevisiae

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Fitness effects of Ty transposition in Saccharomyces cerevisiae

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Posttranslational Control of Ty1 Retrotransposition Occurs at the Level of Protein Processing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Selective autophagy regulates insertional mutagenesis by the Ty1 retrotransposon in Saccharomyces cerevisiae.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Site-specific cross-linking of TBP in vivo and in vitro reveals a direct functional interaction with the SAGA subunit Spt3.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Inferences of evolutionary relationships from a population survey of LTR-retrotransposons and telomeric-associated sequences in the Saccharomyces sensu stricto complex.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

AUG codons at the beginning of protein coding sequences are frequent in eukaryotic mRNAs with a suboptimal start codon context

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

The DNA intermediate in yeast Ty1 element transposition copurifies with virus-like particles: cell-free Ty1 transposition

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

The role of alternative translation start sites in the generation of human protein diversity

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4403431

Molecular phylogeny of Fv1

7 December 2018

1 reference

12 December 2020

Analysis of a Ty1-less variant ofSaccharomyces paradoxus: the gain and loss of Ty1 elements

1 reference

12 December 2020

Ty RNA levels determine the spectrum of retrotransposition events that activate gene expression in Saccharomyces cerevisiae

1 reference

12 December 2020

The SPT3 gene is required for normal transcription of Ty elements in S. cerevisiae

1 reference

12 December 2020

SPT3 interacts with TFIID to allow normal transcription in Saccharomyces cerevisiae

1 reference

12 December 2020

Ty elements transpose through an RNA intermediate

1 reference

12 December 2020

One single in-frame AUG codon is responsible for a diversity of subcellular localizations of glutaredoxin 2 in Saccharomyces cerevisiae

1 reference

12 December 2020

The GAG-like protein of the yeast Ty1 retrotransposon contains a nucleic acid chaperone domain analogous to retroviral nucleocapsid proteins

1 reference

12 December 2020

Identifiers

DOI

10.1128/JVI.03060-14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25609815%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

1 reference