(Q35540650)

8 August 2017

title

Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks (English)

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8 August 2017

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4

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8 August 2017

5

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8 August 2017

Graciela Sotelo

3

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Baocheng Guo

object named as

Baocheng Guo

series ordinal

1

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author name string

Jacquelin DeFaveri

series ordinal

2

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8 August 2017

publication date

24 March 2015

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8 August 2017

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8 August 2017

volume

13

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8 August 2017

page(s)

19

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Creative Commons Attribution 4.0 International

8 August 2017

copyright license

start time

24 March 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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New SNPs for population genetic analysis reveal possible cryptic speciation of eastern Australian sea mullet (Mugil cephalus).

27 July 2018

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RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling

27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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The genomic basis of adaptive evolution in threespine sticklebacks

27 July 2018

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27 July 2018

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Genomics of adaptation and speciation in cichlid fishes: recent advances and analyses in African and Neotropical lineages

27 July 2018

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A genome-wide SNP genotyping array reveals patterns of global and repeated species-pair divergence in sticklebacks

27 July 2018

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27 July 2018

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27 July 2018

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Decoupling of differentiation between traits and their underlying genes in response to divergent selection.

27 July 2018

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The genome sequence of Atlantic cod reveals a unique immune system

27 July 2018

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The future of Baltic Sea populations: local extinction or evolutionary rescue?

27 July 2018

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27 July 2018

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27 July 2018

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Rapid evolution of cold tolerance in stickleback

27 July 2018

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Widespread genomic divergence during sympatric speciation

27 July 2018

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The next generation of molecular markers from massively parallel sequencing of pooled DNA samples

27 July 2018

1 reference

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Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags

27 July 2018

1 reference

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Tracking footprints of artificial selection in the dog genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Population genetic inference from genomic sequence variation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua).

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Population genomics of marine fishes: identifying adaptive variation in space and time

27 July 2018

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Genetics and ecological speciation

27 July 2018

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The Sequence Alignment/Map format and SAMtools

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Fast and accurate short read alignment with Burrows-Wheeler transform

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Divergent selection and heterogeneous genomic divergence

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

The genetics of adaptive shape shift in stickleback: pleiotropy and effect size

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Balancing selection and the evolution of functional polymorphism in Old World monkey TRIM5alpha

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Parasite diversity of sticklebacks from the Baltic Sea.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Biological profiling of gene groups utilizing Gene Ontology

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

The importance of immune gene variability (MHC) in evolutionary ecology and conservation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Using genome scans of DNA polymorphism to infer adaptive population divergence

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Using molecular markers with high mutation rates to obtain estimates of relative population size and to distinguish the effects of gene flow and mutation: a demonstration using data from endemic Mauritian skinks

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Selection in finite populations with multiple alleles. 3. Genetic divergence with centripetal selection and mutation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Importance of plasticity and local adaptation for coping with changing salinity in coastal areas: a test case with barnacles in the Baltic Sea.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Genome-wide single-generation signatures of local selection in the panmictic European eel.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Local adaptation to salinity in the three-spined stickleback?

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Next-generation sequencing for molecular ecology: a caveat regarding pooled samples

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Genetic hitchhiking and the dynamic buildup of genomic divergence during speciation with gene flow

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Heterogeneous Genomic Differentiation in marine threespine sticklebacks: adaptation along an environmental gradient

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

High degree of genetic differentiation in marine three-spined sticklebacks (Gasterosteus aculeatus).

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Evidence for adaptive phenotypic differentiation in Baltic Sea sticklebacks

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Recombination in the threespine stickleback genome--patterns and consequences

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

High degree of cryptic population differentiation in the Baltic Sea herring Clupea harengus

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Genome-wide patterns of standing genetic variation in a marine population of three-spined sticklebacks

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

The effects of migration and drift on local adaptation to a heterogeneous environment.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Genome divergence during evolutionary diversification as revealed in replicate lake-stream stickleback population pairs.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

BioMart: driving a paradigm change in biological data management

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Population genomics of parallel phenotypic evolution in stickleback across stream-lake ecological transitions.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Global analysis of genes involved in freshwater adaptation in threespine sticklebacks (Gasterosteus aculeatus).

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

RADSeq: next-generation population genetics

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Putative causes and consequences of MHC variation within and between locally adapted stickleback demes.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Identification of local- and habitat-dependent selection: scanning functionally important genes in nine-spined sticklebacks (Pungitius pungitius).

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Using environmental correlations to identify loci underlying local adaptation

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

BEDTools: a flexible suite of utilities for comparing genomic features

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Adaptive divergence between freshwater and marine sticklebacks: insights into the role of phenotypic plasticity from an integrated analysis of candidate gene expression

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Circos: an information aesthetic for comparative genomics

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Selection and sticklebacks.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Landscape genetic analyses reveal cryptic population structure and putative selection gradients in a large-scale estuarine environment.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Identifying footprints of directional and balancing selection in marine and freshwater three-spined stickleback (Gasterosteus aculeatus) populations.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Adaptive divergence in a high gene flow environment: Hsc70 variation in the European flounder (Platichthys flesus L.).

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Parallel evolution by correlated response: lateral plate reduction in threespine stickleback.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Divergent selection as revealed by P(ST) and QTL-based F(ST) in three-spined stickleback (Gasterosteus aculeatus) populations along a coastal-inland gradient.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

WEGO: a web tool for plotting GO annotations

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Life on the margin: genetic isolation and diversity loss in a peripheral marine ecosystem, the Baltic Sea.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4410466

Adaptive population divergence: markers, QTL and traits

26 September 2018

1 reference

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Contrasting population structures in two sympatric fishes in the Baltic Sea basin

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0130-8

Genetic biodiversity in the Baltic Sea: species-specific patterns challenge management

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0130-8

On the validity of nested clade phylogeographical analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0130-8

THE GENETIC ARCHITECTURE OF ADAPTATION UNDER MIGRATION-SELECTION BALANCE

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0130-8

Spatial scale and divergent patterns of variation in adapted traits in the ocean

21 January 2018

1 reference

12 December 2020

A Quantitative Survey of Local Adaptation and Fitness Trade‐Offs

1 reference

12 December 2020

Countergradient variation in body shape between two populations of Atlantic cod (Gadus morhua)

1 reference

12 December 2020

A standardized genetic differentiation measure

1 reference

12 December 2020

10.1186/S12915-015-0130-8

Identifiers

DOI

1 reference

Dimensions Publication ID

8 August 2017

0 references

1 reference

8 August 2017

1 reference