(Q35567487)

8 August 2017

title

In vivo effects on intron retention and exon skipping by the U2AF large subunit and SF1/BBP in the nematode Caenorhabditis elegans (English)

1 reference

Splicing FActor CELE_Y116A8C.32

8 August 2017

main subject

Caenorhabditis elegans

0 references

1 reference

GOA release 2020-03-11

Long Ma

1

0 references

H. Robert Horvitz

series ordinal

5

object named as

H Robert Horvitz

1 reference

8 August 2017

Zhiping Tan

2

1 reference

8 August 2017

Yanling Teng

series ordinal

3

1 reference

8 August 2017

Sebastian Hoersch

series ordinal

4

1 reference

8 August 2017

language of work or name

English

0 references

publication date

27 October 2011

1 reference

8 August 2017

1 reference

8 August 2017

volume

17

1 reference

8 August 2017

issue

12

1 reference

8 August 2017

page(s)

2201-2211

1 reference

describes a project that uses

8 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3222132/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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Mutations in the Caenorhabditis elegans U2AF large subunit UAF-1 alter the choice of a 3' splice site in vivo

12 July 2018

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12 July 2018

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STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo

12 July 2018

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12 July 2018

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U2AF binding selects for the high conservation of the C. elegans 3' splice site

12 July 2018

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Human splicing factor SF3a, but not SF1, is essential for pre-mRNA splicing in vivo

12 July 2018

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12 July 2018

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SMU-2 and SMU-1, Caenorhabditis elegans homologs of mammalian spliceosome-associated proteins RED and fSAP57, work together to affect splice site choice

12 July 2018

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12 July 2018

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12 July 2018

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Systematic functional analysis of the Caenorhabditis elegans genome using RNAi

12 July 2018

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Comprehensive proteomic analysis of the human spliceosome

12 July 2018

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Alternative pre-mRNA splicing and proteome expansion in metazoans

12 July 2018

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The MEP-1 zinc-finger protein acts with MOG DEAH box proteins to control gene expression via the fem-3 3' untranslated region in Caenorhabditis elegans

12 July 2018

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Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans

12 July 2018

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12 July 2018

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Kinetic role for mammalian SF1/BBP in spliceosome assembly and function after polypyrimidine tract recognition by U2AF.

12 July 2018

1 reference

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Alternative pre-mRNA splicing: the logic of combinatorial control

12 July 2018

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Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Mechanisms of fidelity in pre-mRNA splicing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Both subunits of U2AF recognize the 3' splice site in Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Functional recognition of the 3' splice site AG by the splicing factor U2AF35.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Splicing factor SF1 from Drosophila and Caenorhabditis: presence of an N-terminal RS domain and requirement for viability

12 July 2018

1 reference

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The intronerator: exploring introns and alternative splicing in Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

High-throughput isolation of Caenorhabditis elegans deletion mutants

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

U2AF35 is encoded by an essential gene clustered in an operon with RRM/cyclophilin in Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Differential distribution of Ca2+-activated K+ channel splice variants among hair cells along the tonotopic axis of the chick cochlea.

12 July 2018

1 reference

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Distribution of Ca2+-activated K+ channel isoforms along the tonotopic gradient of the chicken's cochlea

12 July 2018

1 reference

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Reverse genetics by chemical mutagenesis in Caenorhabditis elegans

12 July 2018

1 reference

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Common themes in the function of transcription and splicing enhancers

12 July 2018

1 reference

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Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Mammalian splicing factor SF1 is encoded by variant cDNAs and binds to RNA

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

The superfamily of arginine/serine-rich splicing factors

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Dynamic RNA-RNA interactions in the spliceosome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

unc-93(e1500): A behavioral mutant of Caenorhabditis elegans that defines a gene with a wild-type null phenotype

12 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

12 July 2018

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1261/RNA.027458.111

The genetics of Caenorhabditis elegans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Drosophila doublesex gene controls somatic sexual differentiation by producing alternatively spliced mRNAs encoding related sex-specific polypeptides.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Regulation of sexual differentiation in D. melanogaster via alternative splicing of RNA from the transformer gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Efficient gene transfer in C.elegans: extrachromosomal maintenance and integration of transforming sequences

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Biochemical characterization of U2 snRNP auxiliary factor: an essential pre-mRNA splicing factor with a novel intranuclear distribution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

SR proteins: a conserved family of pre-mRNA splicing factors

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Transgenic alternative-splicing reporters reveal tissue-specific expression profiles and regulation mechanisms in vivo

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

MEC-8 regulates alternative splicing of unc-52 transcripts in C. elegans hypodermal cells.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Functional analysis of an intron 3' splice site in Caenorhabditis elegans.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

The mec-8 gene of C. elegans encodes a protein with two RNA recognition motifs and regulates alternative splicing of unc-52 transcripts.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222132

Alternative splicing affecting a novel domain in the C. elegans EGL-15 FGF receptor confers functional specificity

24 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22033331

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1261/RNA.027458.111

1 reference

8 August 2017

1 reference

8 August 2017

1 reference